Pre_GI: BLASTN Hits

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Query: NC_007622:1558753 Staphylococcus aureus RF122, complete genome

Start: 1558753, End: 1577432, Length: 18680

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a common strain associated with mastitis in cattle. This organism is responsible for several hundred million dollars worth of annual economic loss to animal production each year. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011999:1320159*1320159133954619388Macrococcus caseolyticus JCSC5402, complete genome0656BLASTN svgBLASTP svg
NC_003909:4064904*4064904408337118468Bacillus cereus ATCC 10987, complete genome1e-109404BLASTN svgBLASTP svg
NC_003997:4116944*4116944413809921156Bacillus anthracis str. Ames, complete genome2e-102381BLASTN svgBLASTP svg
NC_005945:4116978*4116978413524218265Bacillus anthracis str. Sterne, complete genome2e-102381BLASTN svgBLASTP svg
NC_005957:4104880*4104880412588721008Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-102381BLASTN svgBLASTP svg
NC_007530:4117071*4117071413809921029Bacillus anthracis str. 'Ames Ancestor', complete genome2e-102381BLASTN svgBLASTP svg
NC_008600:4101748*4101748412497023223Bacillus thuringiensis str. Al Hakam, complete genome2e-102381BLASTN svgBLASTP svg
NC_011772:4255161*4255161427769522535Bacillus cereus G9842, complete genome2e-102381BLASTN svgBLASTP svg
NC_012472:4119192*4119192414241423223Bacillus cereus 03BB102, complete genome2e-102381BLASTN svgBLASTP svg
NC_004722:4244730*4244730426728722558Bacillus cereus ATCC 14579, complete genome4e-100373BLASTN svgBLASTP svg
NC_006274:4159096*4159096417709918004Bacillus cereus E33L, complete genome4e-100373BLASTN svgBLASTP svg
NC_010184:4155345*4155345417709921755Bacillus weihenstephanensis KBAB4, complete genome4e-100373BLASTN svgBLASTP svg
NC_014335:4027105*4027105404657819474Bacillus cereus biovar anthracis str. CI chromosome, complete4e-100373BLASTN svgBLASTP svg
NC_006449:121462*12146214259721136Streptococcus thermophilus CNRZ1066, complete genome2e-50208BLASTN svgBLASTP svg
NC_006448:121435*12143514257121137Streptococcus thermophilus LMG 18311, complete genome2e-50208BLASTN svgBLASTP svg
NC_002952:2256000*2256000227809922100Staphylococcus aureus subsp. aureus MRSA252, complete genome6e-50206BLASTN svgBLASTP svg
NC_012925:27570427570429851422811Streptococcus suis P1/7, complete genome2e-46194BLASTN svgBLASTP svg
NC_002951:2153571*2153571217716123591Staphylococcus aureus subsp. aureus COL, complete genome5e-35157BLASTN svgBLASTP svg
NC_007793:2217872*2217872224096323092Staphylococcus aureus subsp. aureus USA300, complete genome5e-35157BLASTN svgBLASTP svg
NC_007795:2163706*2163706218609922394Staphylococcus aureus subsp. aureus NCTC 8325, complete genome5e-35157BLASTN svgBLASTP svg
NC_010079:2217767*2217767224135723591Staphylococcus aureus subsp. aureus USA300_TCH1516, complete5e-35157BLASTN svgBLASTP svg
NC_002745:2152000*2152000217427622277Staphylococcus aureus subsp. aureus N315, complete genome1e-32149BLASTN svgBLASTP svg
NC_002758:2227874*2227874225013222259Staphylococcus aureus subsp. aureus Mu50, complete genome1e-32149BLASTN svgBLASTP svg
NC_002953:2157781*2157781218009922319Staphylococcus aureus subsp. aureus MSSA476, complete genome1e-32149BLASTN svgBLASTP svg
NC_003923:2178000*2178000220034322344Staphylococcus aureus subsp. aureus MW2, complete genome1e-32149BLASTN svgBLASTP svg
NC_009782:2230000*2230000225234622347Staphylococcus aureus subsp. aureus Mu3, complete genome1e-32149BLASTN svgBLASTP svg
NC_015760:123929*12392914613122203Streptococcus salivarius CCHSS3, complete genome7e-31143BLASTN svgBLASTP svg
NC_011047:255208*25520828174126534Candidatus Phytoplasma mali, complete genome3e-30141BLASTN svgBLASTP svg
NC_014499:87528*8752810905021523Candidatus Sulcia muelleri CARI chromosome, complete genome5e-29137BLASTN svgBLASTP svg
NC_010611:31976*319765159919624Acinetobacter baumannii ACICU, complete genome7e-28133BLASTN svgBLASTP svg
NC_014004:66631*666318870622076Candidatus Sulcia muelleri DMIN chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_002570:1426000*1426000145044224443Bacillus halodurans C-125, complete genome7e-22113BLASTN svgBLASTP svg
NC_012563:3374904*3374904339859023687Clostridium botulinum A2 str. Kyoto, complete genome4e-20107BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome4e-20107BLASTN svgBLASTP svg
NC_002951:1848684*1848684187248723804Staphylococcus aureus subsp. aureus COL, complete genome6e-19103BLASTN svgBLASTP svg
NC_002951:14744651474465151709942635Staphylococcus aureus subsp. aureus COL, complete genome3e-18101BLASTN svgBLASTP svg
NC_002953:14646931464693150259937907Staphylococcus aureus subsp. aureus MSSA476, complete genome3e-18101BLASTN svgBLASTP svg
NC_003923:14361391436139147709940961Staphylococcus aureus subsp. aureus MW2, complete genome3e-18101BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_007793:14514091451409149409942691Staphylococcus aureus subsp. aureus USA300, complete genome3e-18101BLASTN svgBLASTP svg
NC_007795:13705001370500141025039751Staphylococcus aureus subsp. aureus NCTC 8325, complete genome3e-18101BLASTN svgBLASTP svg
NC_010079:14653561465356150892843573Staphylococcus aureus subsp. aureus USA300_TCH1516, complete3e-18101BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_002528:148274*14827417635828085Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete2e-1695.6BLASTN svgBLASTP svg
NC_004545:141478*14147816560324126Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013123:78786*7878610552026735Candidatus Sulcia muelleri SMDSEM, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_008261:2524913*2524913254259917687Clostridium perfringens ATCC 13124, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_002745:14325851432585147535342769Staphylococcus aureus subsp. aureus N315, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_002758:15089961508996155209943104Staphylococcus aureus subsp. aureus Mu50, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_009782:15103961510396155316542770Staphylococcus aureus subsp. aureus Mu3, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013515:14834711483471150341619946Streptobacillus moniliformis DSM 12112, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_020291:1014333*1014333103759923267Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002952:25505002550500257443923940Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013517:82510082510084990924810Sebaldella termitidis ATCC 33386, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012225:236490*23649025991523426Brachyspira hyodysenteriae WA1, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_002745:1804000*1804000182484520846Staphylococcus aureus subsp. aureus N315, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_002758:1880323*1880323190322422902Staphylococcus aureus subsp. aureus Mu50, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_007622:1751500*1751500177342921930Staphylococcus aureus RF122, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_009782:1881722*1881722190409922378Staphylococcus aureus subsp. aureus Mu3, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_010001:2836995*2836995286257025576Clostridium phytofermentans ISDg, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_007795:1774725*1774725179848923765Staphylococcus aureus subsp. aureus NCTC 8325, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012004:10536821053682108422130540Streptococcus uberis 0140J, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014150:1*11978219782Brachyspira murdochii DSM 12563 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_007622:23993472399347242439425048Staphylococcus aureus RF122, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_005303:780557*78055780913328577Onion yellows phytoplasma OY-M, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_002953:1819411*1819411184209922689Staphylococcus aureus subsp. aureus MSSA476, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_003923:1841500*1841500186443222933Staphylococcus aureus subsp. aureus MW2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_004070:77228177228179114218862Streptococcus pyogenes MGAS315, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_004606:90432390432392357019248Streptococcus pyogenes SSI-1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_005042:1719055*1719055174729928245Prochlorococcus marinus subsp. marinus str. CCMP1375, complete2e-0971.9BLASTN svgBLASTP svg
NC_007793:1871165*1871165189479823634Staphylococcus aureus subsp. aureus USA300, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010079:1871915*1871915189554823634Staphylococcus aureus subsp. aureus USA300_TCH1516, complete2e-0971.9BLASTN svgBLASTP svg
NC_011978:975333*975333100082825496Thermotoga neapolitana DSM 4359, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_000908:160072*16007221039050319Mycoplasma genitalium G37, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007622:2117188*2117188213617218985Staphylococcus aureus RF122, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008593:1704207*1704207172452320317Clostridium novyi NT, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010544:26200026200028481122812Candidatus Phytoplasma australiense, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015866:23344823344825473021283Rickettsia heilongjiangensis 054 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004337:1065609*1065609109071125103Shigella flexneri 2a str. 301, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_003909:11395561139556116247022915Bacillus cereus ATCC 10987, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005061:96536*9653614201245477Candidatus Blochmannia floridanus, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011566:3994239*3994239401970925471Shewanella piezotolerans WP3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014751:449001*44900146805619056Mycoplasma leachii PG50 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014909:121771*12177114449822728Candidatus Blochmannia vafer str. BVAF chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011134:1222739*1222739124792825190Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete2e-0661.9BLASTN svgBLASTP svg
NC_009850:2169459*2169459220320233744Arcobacter butzleri RM4018, complete genome9e-0660BLASTN svgBLASTP svg
NC_009881:23650023650025585219353Rickettsia akari str. Hartford, complete genome9e-0660BLASTN svgBLASTP svg
NC_009882:23240023240025009917700Rickettsia rickettsii str. 'Sheila Smith', complete genome9e-0660BLASTN svgBLASTP svg
NC_009900:23198323198325409922117Rickettsia massiliae MTU5, complete genome9e-0660BLASTN svgBLASTP svg
NC_010263:23248223248225109918618Rickettsia rickettsii str. Iowa, complete genome9e-0660BLASTN svgBLASTP svg
NC_010280:769639*76963979282723189Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome9e-0660BLASTN svgBLASTP svg
NC_010287:769600*76960079278823189Chlamydia trachomatis 434/Bu, complete genome9e-0660BLASTN svgBLASTP svg
NC_011898:649000*64900067139722398Clostridium cellulolyticum H10, complete genome9e-0660BLASTN svgBLASTP svg
NC_015744:769907*76990779249722591Chlamydia trachomatis L2c chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_016050:23600023600025587419875Rickettsia japonica YH, complete genome9e-0660BLASTN svgBLASTP svg
NC_019903:3048132*3048132306659918468Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,9e-0660BLASTN svgBLASTP svg
NC_004061:146862*14686216626919408Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome9e-0660BLASTN svgBLASTP svg