Pre_GI Gene

Some Help

Host: NC_015744 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015744:769907 Chlamydia trachomatis L2c chromosome, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This strain was isolated from a man with severe proctitis. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7699077718891983chaperone protein DnaKQuickGO ontologyBLASTP
771861771983123hypothetical protein
7721827742662085ribonuclease RQuickGO ontologyBLASTP
774522775286765putative zinc ribbon domain proteinQuickGO ontologyBLASTP
775709776695987arabinose 5-phosphate isomeraseQuickGO ontologyBLASTP
7767277778931167dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complexQuickGO ontologyBLASTP
7781397793771239sodiumdicarboxylate symporter family proteinQuickGO ontologyBLASTP
7793747804831110tetraacyldisaccharide 4-kinaseQuickGO ontologyBLASTP
780649781458810spoU rRNA Methylase family proteinQuickGO ontologyBLASTP
781446782270825N6-adenine-specific DNA methylaseQuickGO ontologyBLASTP
782270782869600riboflavin synthase alpha subunitQuickGO ontologyBLASTP
783262783726465transcriptional regulator NrdRQuickGO ontologyBLASTP
783740784114375prokaryotic dksAtraR C4-type zinc finger family proteinQuickGO ontologyBLASTP
784120784623504signal peptidase IIQuickGO ontologyBLASTP
7847917860861296amino acid carrier family proteinQuickGO ontologyBLASTP
7863057875791275polyA polymerase family proteinQuickGO ontologyBLASTP
7876407894631824lipid-A-disaccharide synthaseQuickGO ontologyBLASTP
7895707924972928putative outer membrane protein pmp10QuickGO ontologyBLASTP