Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:2836995 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
283699528401263132pullulanase type IQuickGO ontologyBLASTP
28401112840968858hypothetical protein
28409492841791843binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
284180228431301329binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
284329928446211323extracellular solute-binding protein family 1QuickGO ontologyBLASTP
284527528462761002ribosomal protein L11 methyltransferaseQuickGO ontologyBLASTP
284637328475181146chaperone protein DnaJQuickGO ontologyBLASTP
284786528497271863chaperone protein DnaKQuickGO ontologyBLASTP
28499482850622675GrpE proteinQuickGO ontologyBLASTP
285064428516811038heat-inducible transcription repressor HrcAQuickGO ontologyBLASTP
285196328531891227oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
285321228550261815GTP-binding protein LepAQuickGO ontologyBLASTP
285578128572321452Stage II sporulation P family proteinQuickGO ontologyBLASTP
28572392858162924GPR endopeptidaseQuickGO ontologyBLASTP
28583962858659264ribosomal protein S20QuickGO ontologyBLASTP
28592632859625363transcriptional regulator GntR familyQuickGO ontologyBLASTP
28596122860511900ABC transporter relatedQuickGO ontologyBLASTP
286048628625702085hypothetical protein