Pre_GI: BLASTN Hits

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Query: NC_007492:2203220 Pseudomonas fluorescens PfO-1, complete genome

Start: 2203220, End: 2224173, Length: 20954

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome04433BLASTN svgBLASTP svg
NC_012660:4558122*4558122459234134220Pseudomonas fluorescens SBW25 chromosome, complete genome03368BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome01717BLASTN svgBLASTP svg
NC_002947:2809591*2809591283264923059Pseudomonas putida KT2440, complete genome01717BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome0993BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome0965BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome0781BLASTN svgBLASTP svg
NC_008463:2467219*2467219250339236174Pseudomonas aeruginosa UCBPP-PA14, complete genome0767BLASTN svgBLASTP svg
NC_002516:3079850*3079850310675226903Pseudomonas aeruginosa PAO1, complete genome0749BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome0678BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome0652BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome1e-162581BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome1e-162581BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-127462BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome4e-39170BLASTN svgBLASTP svg
NC_007645:4677965*4677965469591417950Hahella chejuensis KCTC 2396, complete genome8e-28133BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome3e-21111BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome7e-19103BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome3e-18101BLASTN svgBLASTP svg
NC_012779:1820244*1820244184249822255Edwardsiella ictaluri 93-146, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012880:2425330*2425330245003424705Dickeya dadantii Ech703, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007298:2856104*2856104289461138508Dechloromonas aromatica RCB, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013850:2103469*2103469214696843500Klebsiella variicola At-22 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009512:33345793334579336267428096Pseudomonas putida F1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007946:38110823811082383566424583Escherichia coli UTI89, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008563:38438593843859386844824590Escherichia coli APEC O1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013959:1723037*1723037174709924063Sideroxydans lithotrophicus ES-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011740:34534553453455348056527111Escherichia fergusonii ATCC 35469, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011751:39842363984236400841624181Escherichia coli UMN026 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012912:2216749*2216749224082124073Dickeya zeae Ech1591, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003902:2903493*2903493292609922607Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_007086:1988000*1988000201548327484Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008781:2981868*2981868300465822791Polaromonas naphthalenivorans CJ2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002696:1154996*1154996117718622191Caulobacter crescentus CB15, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete6e-0763.9BLASTN svgBLASTP svg
NC_007086:24770402477040251517738138Xanthomonas campestris pv. campestris str. 8004, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007613:1353500*1353500137891925420Shigella boydii Sb227, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010658:1772994*1772994179509922106Shigella boydii CDC 3083-94, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014910:2585747*2585747260852622780Alicycliphilus denitrificans BC chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_016026:997225*997225103720039976Micavibrio aeruginosavorus ARL-13 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020063:2011019*2011019203659925581Enterobacteriaceae bacterium strain FGI 57, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014365:28104052810405283837427970Desulfarculus baarsii DSM 2075 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_008344:2434344*2434344245352619183Nitrosomonas eutropha C91, complete genome1e-0560BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete1e-0560BLASTN svgBLASTP svg