Pre_GI: BLASTN Hits

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Query: NC_007005:5367454 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 5367454, End: 5394263, Length: 26810

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome07228BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome04629BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome04585BLASTN svgBLASTP svg
NC_002516:4747154*4747154479172444571Pseudomonas aeruginosa PAO1, complete genome03568BLASTN svgBLASTP svg
NC_021150:603447*60344762358120135Azotobacter vinelandii CA6, complete genome03253BLASTN svgBLASTP svg
NC_012560:603447*60344762358120135Azotobacter vinelandii DJ, complete genome03253BLASTN svgBLASTP svg
NC_014541:39275003927500394969522196Ferrimonas balearica DSM 9799 chromosome, complete genome2e-94355BLASTN svgBLASTP svg
NC_020181:3585898*3585898362589840001Enterobacter aerogenes EA1509E, complete genome9e-87329BLASTN svgBLASTP svg
NC_011149:43903154390315441878928475Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-86327BLASTN svgBLASTP svg
NC_012912:777592*77759280009922508Dickeya zeae Ech1591, complete genome8e-84319BLASTN svgBLASTP svg
NC_003197:44706834470683449915328471Salmonella typhimurium LT2, complete genome8e-84319BLASTN svgBLASTP svg
NC_006905:44053014405301444609940799Salmonella enterica subsp. enterica serovar Choleraesuis str2e-81311BLASTN svgBLASTP svg
NC_011083:44666344466634449511028477Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-81311BLASTN svgBLASTP svg
NC_010102:43965004396500442510928610Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-79303BLASTN svgBLASTP svg
NC_006511:42254554225455425318227728Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-79303BLASTN svgBLASTP svg
NC_004631:43004574300457432892728471Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-79303BLASTN svgBLASTP svg
NC_003198:43158074315807434427728471Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-79303BLASTN svgBLASTP svg
NC_010067:33103363310336336496054625Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-74287BLASTN svgBLASTP svg
NC_011080:44618514461851449032128471Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-74287BLASTN svgBLASTP svg
NC_021066:37694053769405379116821764Raoultella ornithinolytica B6, complete genome3e-74287BLASTN svgBLASTP svg
NC_007434:78850078850080659718098Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-67266BLASTN svgBLASTP svg
NC_006350:59589359589364981453922Burkholderia pseudomallei K96243 chromosome 1, complete sequence1e-67266BLASTN svgBLASTP svg
NC_010682:28841528841531019821784Ralstonia pickettii 12J chromosome 1, complete sequence4e-61244BLASTN svgBLASTP svg
NC_007613:41197714119771413859918829Shigella boydii Sb227, complete genome9e-56226BLASTN svgBLASTP svg
NC_010658:42573104257310427618618877Shigella boydii CDC 3083-94, complete genome6e-51210BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome2e-44188BLASTN svgBLASTP svg
NC_013421:40060854006085403278526701Pectobacterium wasabiae WPP163, complete genome2e-41178BLASTN svgBLASTP svg
NC_005085:4499500*4499500451890519406Chromobacterium violaceum ATCC 12472, complete genome2e-32149BLASTN svgBLASTP svg
NC_007645:6327428*6327428635426926842Hahella chejuensis KCTC 2396, complete genome4e-30141BLASTN svgBLASTP svg
NC_010645:73573735739609922527Bordetella avium 197N, complete genome2e-29139BLASTN svgBLASTP svg
NC_004757:2657490*2657490268195024461Nitrosomonas europaea ATCC 19718, complete genome7e-29137BLASTN svgBLASTP svg
NC_010524:4402478*4402478442898926512Leptothrix cholodnii SP-6, complete genome3e-28135BLASTN svgBLASTP svg
NC_012691:24140424140426512723724Tolumonas auensis DSM 9187, complete genome6e-26127BLASTN svgBLASTP svg
NC_016002:379692*37969240188922198Pseudogulbenkiania sp. NH8B, complete genome1e-24123BLASTN svgBLASTP svg
NC_014915:3207300*3207300323063123332Geobacillus sp. Y412MC52 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_013411:3201331*3201331322466223332Geobacillus sp. Y412MC61, complete genome1e-24123BLASTN svgBLASTP svg
NC_011992:392534*39253441503522502Acidovorax ebreus TPSY, complete genome1e-24123BLASTN svgBLASTP svg
NC_019897:20952320952323439624874Thermobacillus composti KWC4 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_010002:1145951*1145951116748921539Delftia acidovorans SPH-1, complete genome2e-23119BLASTN svgBLASTP svg
NC_013282:3962188*3962188399784335656Cronobacter turicensis, complete genome2e-23119BLASTN svgBLASTP svg
NC_018750:4311300*4311300432914617847Streptomyces venezuelae ATCC 10712, complete genome2e-23119BLASTN svgBLASTP svg
NC_013093:65111086511108653012519018Actinosynnema mirum DSM 43827, complete genome6e-23117BLASTN svgBLASTP svg
NC_008767:92781092781095056622757Neisseria meningitidis FAM18, complete genome6e-23117BLASTN svgBLASTP svg
NC_008149:3790897*3790897381416023264Yersinia pestis Nepal516, complete genome2e-22115BLASTN svgBLASTP svg
NC_008782:401667*40166742183920173Acidovorax sp. JS42, complete genome2e-22115BLASTN svgBLASTP svg
NC_010159:74181974181976361621798Yersinia pestis Angola, complete genome2e-22115BLASTN svgBLASTP svg
NC_010465:4222586*4222586424312420539Yersinia pseudotuberculosis YPIII, complete genome2e-22115BLASTN svgBLASTP svg
NC_013508:3387272*3387272341154824277Edwardsiella tarda EIB202, complete genome2e-22115BLASTN svgBLASTP svg
NC_002937:1395977*1395977141908123105Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-21113BLASTN svgBLASTP svg
NC_015563:6167512*6167512618907121560Delftia sp. Cs1-4 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_007614:25172262517226254029423069Nitrosospira multiformis ATCC 25196 chromosome 1, complete6e-20107BLASTN svgBLASTP svg
NC_015458:2998000*2998000302249324494Pusillimonas sp. T7-7 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_020209:4312892*4312892435777044879Pseudomonas poae RE*1-1-14, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013530:16492141649214168158732374Xylanimonas cellulosilytica DSM 15894, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015559:36451813645181366972124541Marinomonas posidonica IVIA-Po-181 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009943:748788*74878877355124764Candidatus Desulfococcus oleovorans Hxd3, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome9e-1383.8BLASTN svgBLASTP svg
NC_010125:3467379*3467379349031122933Gluconacetobacter diazotrophicus PAl 5, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_011420:3650724*3650724367371922996Rhodospirillum centenum SW, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_011891:2264853*2264853228864223790Anaeromyxobacter dehalogenans 2CP-1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_014844:659829*65982970618546357Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015064:28711522871152289427523124Acidobacterium sp. MP5ACTX9 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007760:2175992*2175992219609920108Anaeromyxobacter dehalogenans 2CP-C, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009092:179226*17922620808728862Shewanella loihica PV-4, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011145:2190531*2190531221308322553Anaeromyxobacter sp. K, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015977:2718437*2718437274615427718Roseburia hominis A2-183 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015581:128350*12835015453826189Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013194:3984377*3984377400260218226Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete5e-1177.8BLASTN svgBLASTP svg
NC_010645:31500*315005259921100Bordetella avium 197N, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013159:403918*40391842932125404Saccharomonospora viridis DSM 43017, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014366:478000*47800050156823569Gamma proteobacterium HdN1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007908:4677856*4677856471249934644Rhodoferax ferrireducens T118, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_018720:2097694*2097694213123233539Bifidobacterium asteroides PRL2011 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002128:35000350006549030491Escherichia coli O157:H7 str. Sakai plasmid pO157, complete1e-0869.9BLASTN svgBLASTP svg
NC_007414:56508565089199935492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008781:330919*33091934993719019Polaromonas naphthalenivorans CJ2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009053:89596589596592080824844Actinobacillus pleuropneumoniae L20, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014836:2848000*2848000287078522786Desulfurispirillum indicum S5 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015572:4209000*4209000424633837339Methylomonas methanica MC09 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:25654172565417258963424218Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008576:1061171*1061171108033619166Magnetococcus sp. MC-1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007947:290864*29086430939718534Methylobacillus flagellatus KT, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007760:47510004751000477056419565Anaeromyxobacter dehalogenans 2CP-C, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011662:13195613195615548623531Thauera sp. MZ1T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013851:60808960808963129123203Allochromatium vinosum DSM 180 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013855:89265789265791607423418Azospirillum sp. B510 plasmid pAB510a, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003911:253400*25340027913725738Silicibacter pomeroyi DSS-3, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005773:5310339*5310339533285822520Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010524:93319193319195763824448Leptothrix cholodnii SP-6, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014210:2277971*2277971230264924679Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,8e-0763.9BLASTN svgBLASTP svg
NC_014935:711765*71176576064648882Nitratifractor saLSUginis DSM 16511 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003919:33961363396136342036024225Xanthomonas axonopodis pv. citri str. 306, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007912:1231436*1231436125527523840Saccharophagus degradans 2-40, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008942:960306*96030698261122306Methanocorpusculum labreanum Z, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011769:78749678749681183124336Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014148:602864*60286462674423881Planctomyces limnophilus DSM 3776 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014221:38000*380005888920890Truepera radiovictrix DSM 17093 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003063:20593112059311208899929689Agrobacterium tumefaciens str. C58 chromosome linear, complete3e-0661.9BLASTN svgBLASTP svg
NC_003305:112033020330Agrobacterium tumefaciens str. C58 chromosome linear, complete3e-0661.9BLASTN svgBLASTP svg