Pre_GI Gene

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Host: NC_003063 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003063:2059311 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Host Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
20593112060240930hypothetical proteinBLASTP
206023720613521116hypothetical proteinBLASTP
20613832062171789hypothetical proteinBLASTP
20623962063061666hypothetical proteinBLASTP
20631322063617486hypothetical proteinBLASTP
20635862063879294hypothetical proteinBLASTP
20638762064193318hypothetical proteinBLASTP
20642152064766552hypothetical proteinBLASTP
20651602065423264hypothetical proteinBLASTP
20654202065824405hypothetical proteinBLASTP
20661052066671567hypothetical proteinBLASTP
20668842067240357hypothetical proteinBLASTP
20673812068160780hypothetical proteinBLASTP
206818720692541068hypothetical proteinBLASTP
20696792069933255hypothetical proteinBLASTP
206995320713711419hypothetical proteinBLASTP
20717782071993216hypothetical proteinBLASTP
20723812072764384hypothetical proteinBLASTP
20731082073821714hypothetical proteinBLASTP