Pre_GI: BLASTN Hits

Some Help

Query: NC_003454:618290 Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete

Start: 618290, End: 638315, Length: 20026

Host Lineage: Fusobacterium nucleatum; Fusobacterium; Fusobacteriaceae; Fusobacteriales; Fusobacteria; Bacteria

General Information: Normal oral and gastrointestinal bacterium. This genus contains mostly obligately anaerobic bacilli. Many of the isolates are spindle-shaped, or fusiform. This organism belongs to the normal microflora of the human oral and gastrointestinal tracts. It is a very long and slender spindle-shaped bacillus with sharply pointed ends that is characterized by the ability to invade soft tissues. It acts as a bridge between early and late colonizers of the tooth surface, and exerts synergism with other bacteria in mixed infections. It is most frequently associated with periodontal diseases, as well as with some invasive human infections of the head and neck, chest, lung, liver and abdomen, and some anginas. One of the major amino acid and sugar fermentation pathways in Fusobacterium nucleatum produces butyric and acetic acids.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008261:1*12066720667Clostridium perfringens ATCC 13124, complete genome9e-43182BLASTN svgBLASTP svg
NC_003366:112067020670Clostridium perfringens str. 13, complete genome9e-43182BLASTN svgBLASTP svg
NC_008262:111259912599Clostridium perfringens SM101, complete genome2e-40174BLASTN svgBLASTP svg
NC_013515:347671*34767139636648696Streptobacillus moniliformis DSM 12112, complete genome8e-28133BLASTN svgBLASTP svg
NC_018664:1*12406624066Clostridium acidurici 9a chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_009922:1*12276322763Alkaliphilus oremlandii OhILAs, complete genome2e-19105BLASTN svgBLASTP svg
NC_014654:1*12910529105Halanaerobium sp. 'sapolanicus' chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_010516:1*11931119311Clostridium botulinum B1 str. Okra, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_010520:1*11926119261Clostridium botulinum A3 str. Loch Maree, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012563:1*11946419464Clostridium botulinum A2 str. Kyoto, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_010723:1*11759917599Clostridium botulinum E3 str. Alaska E43, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010674:1*12076220762Clostridium botulinum B str. Eklund 17B, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019978:7535*75353211824584Halobacteroides halobius DSM 5150, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_005303:553500*55350057580722308Onion yellows phytoplasma OY-M, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009089:1*13459934599Clostridium difficile 630, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013316:1*14895548955Clostridium difficile R20291, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015682:379373*37937340238523013Thermodesulfobacterium sp. OPB45 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011567:1*13972539725Anoxybacillus flavithermus WK1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011047:255208*25520828174126534Candidatus Phytoplasma mali, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003366:23561482356148238179725650Clostridium perfringens str. 13, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008262:22424322242432226666224231Clostridium perfringens SM101, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008593:15131071513107153682423718Clostridium novyi NT, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013515:1391143*1391143141028719145Streptobacillus moniliformis DSM 12112, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014328:1*11850018500Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008593:2527064*2527064255549928436Clostridium novyi NT, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014393:1*11925119251Clostridium cellulovorans 743B chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015958:11511115113009918589Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015185:13521711352171137893326763Desulfurobacterium thermolithotrophum DSM 11699 chromosome,6e-1073.8BLASTN svgBLASTP svg
NC_014378:525717*52571755155125835Acetohalobium arabaticum DSM 5501 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014378:4428*44282422619799Acetohalobium arabaticum DSM 5501 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010544:22729622729625207524780Candidatus Phytoplasma australiense, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007350:111259712597Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,6e-1073.8BLASTN svgBLASTP svg
NC_013192:2434664*2434664246949934836Leptotrichia buccalis DSM 1135, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014614:6115*61154920643092Clostridium sticklandii, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_019949:10341210341212608322672Mycoplasma cynos C142 complete genome2e-0971.9BLASTN svgBLASTP svg
NC_019949:956791*95679198180325013Mycoplasma cynos C142 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015687:1*11859918599Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007292:1*12081720817Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003030:1*11859918599Clostridium acetobutylicum ATCC 824, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019970:8938*89382966920732Thermoanaerobacterium thermosaccharolyticum M0795, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015555:447844782276918292Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_010718:1*12007820078Natranaerobius thermophilus JW/NM-WN-LF, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013171:1189178917Anaerococcus prevotii DSM 20548, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014410:8694*86942877520082Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_020304:1222000*1222000125033028331Desulfocapsa sulfexigens DSM 10523, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006570:16259091625909164817822270Francisella tularensis subsp. tularensis Schu 4, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007355:35801003580100360009920000Methanosarcina barkeri str. fusaro chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_007880:50840750840753094422538Francisella tularensis subsp. holarctica, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008245:16257151625715164632420610Francisella tularensis subsp. tularensis FSC 198, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008369:51499551499553466619672Francisella tularensis subsp. holarctica OSU18, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008601:1560482*1560482160300942528Francisella tularensis subsp. novicida U112, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009749:51026651026652859918334Francisella tularensis subsp. holarctica FTA, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010516:3368951*3368951339250323553Clostridium botulinum B1 str. Okra, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010677:35383935383937621022372Francisella tularensis subsp. mediasiatica FSC147, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012563:3556763*3556763357533918577Clostridium botulinum A2 str. Kyoto, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014150:1902241*1902241192384321603Brachyspira murdochii DSM 12563 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_021182:111460614606Clostridium pasteurianum BC1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005061:52470452470454944624743Candidatus Blochmannia floridanus, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014497:180000*18000020623126232Candidatus Zinderia insecticola CARI chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020291:1*12890828908Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome9e-0660BLASTN svgBLASTP svg
NC_011661:1542335*1542335156160219268Dictyoglomus turgidum DSM 6724, complete genome9e-0660BLASTN svgBLASTP svg
NC_008277:428926*42892646331934394Borrelia afzelii PKo, complete genome9e-0660BLASTN svgBLASTP svg
NC_007205:424500*42450044975125252Candidatus Pelagibacter ubique HTCC1062, complete genome9e-0660BLASTN svgBLASTP svg
NC_004557:32094*320945657224479Clostridium tetani E88, complete genome9e-0660BLASTN svgBLASTP svg