Pre_GI: BLASTP Hits

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Query: NC_016830:1719407:1741521 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1741521, End: 1742693, Length: 1173

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:1741816:1767111176711117682711161Pseudomonas fluorescens Pf-5, complete genomemajor facilitator family transporter2e-111402
NC_009512:1518113:1551949155194915531211173Pseudomonas putida F1, complete genomeprotein of unknown function DUF12282e-93342
NC_008150:905000:9212039212039223541152Yersinia pestis Antiqua, complete genomehypothetical protein3e-46186
NC_010634:1809500:1825566182556618267171152Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein5e-46185
NC_003143:1691000:1707339170733917084901152Yersinia pestis CO92, complete genomehypothetical protein5e-46185
NC_004088:2937077:2939144293914429402951152Yersinia pestis KIM, complete genometransport protein5e-46185
NC_006155:1807902:1825357182535718265081152Yersinia pseudotuberculosis IP 32953, complete genomepossible MFS Superfamily transporter5e-46185
NC_005810:1520000:1536243153624315373941152Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-46185
NC_008149:2773139:2775206277520627763571152Yersinia pestis Nepal516, complete genomehypothetical protein5e-46185
NC_009381:1655731:1657798165779816589491152Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-46185
NC_009708:2788855:2790922279092227920731152Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemajor facilitator transporter5e-46185
NC_014029:1760948:1781844178184417829951152Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-46185
NC_017154:1707500:1723937172393717250881152Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-46185
NC_017160:2054289:2056356205635620575071152Yersinia pestis D182038 chromosome, complete genomehypothetical protein5e-46185
NC_017168:3948514:3950581395058139517321152Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-46185
NC_017265:2557476:2559543255954325606941152Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-46185
NC_010465:2820500:2821372282137228225231152Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF12287e-46184
NC_008800:3061484:3063522306352230646941173Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein5e-45182
NC_015224:1703130:1720433172043317216051173Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein9e-45181
NC_015566:4662171:4668155466815546693181164Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-35148
NC_010551:1462827:1475730147573014769711242Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceprotein of unknown function DUF12282e-1790.1
NC_011662:131956:1494221494221506301209Thauera sp. MZ1T, complete genomeprotein of unknown function DUF12282e-1687.4
NC_010172:480000:5291465291465303661221Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF12284e-1582.8
NC_004547:913553:9347149347149358801167Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-0962.8
NC_012917:833721:8531128531128542781167Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein7e-0962
NC_012846:1837924:1867809186780918689871179Bartonella grahamii as4aup, complete genomeputative sugar transporter2e-0757