Pre_GI: BLASTP Hits

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Query: NC_016830:1645879:1663436 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1663436, End: 1664242, Length: 807

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:2725201:273201127320112732829819Cronobacter sakazakii Sp291, complete genomeAraC family transcriptional regulator6e-93340
NC_013850:3340882:336885833688583369664807Klebsiella variicola At-22 chromosome, complete genomeAraC protein arabinose-binding/dimerization2e-87322
NC_008392:1029134:103421010342101034986777Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, AraC family2e-71269
NC_010557:679656:702640702640703509870Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-68259
NC_005773:5310339:532689853268985327734837Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, AraC family5e-37154
NC_016816:2925459:292545929254592926304846Pantoea ananatis LMG 5342, complete genomeAraC family transcriptional regulator7e-33140
NC_004129:5723787:575189957518995752744846Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family1e-30133
NC_004547:667988:688832688832689677846Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator1e-30133
NC_015559:3511231:351357435135743514419846Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeAraC family transcriptional regulator3e-27122
NC_009654:4624459:463007746300774630919843Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator1e-26120
NC_016935:3103430:311173231117323112508777Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator7e-23107
NC_015690:2553837:256220525622052562981777Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC protein, arabinose-binding/dimerization7e-23107
NC_015410:2505168:251160125116012512404804Pseudomonas mendocina NK-01 chromosome, complete genomeAraC family transcriptional regulator1e-21103
NC_003155:4906639:492314449231444923956813Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator2e-21103
NC_010002:3357752:337748733774873378314828Delftia acidovorans SPH-1, complete genometranscriptional regulator, AraC family3e-21102
NC_015733:2194676:220721222072122208114903Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator1e-20100
NC_003888:4613000:461515446151544615969816Streptomyces coelicolor A3(2), complete genomeAraC-family transcriptional regulator9e-21100
NC_009092:1684467:168524516852451686084840Shewanella loihica PV-4, complete genometranscriptional regulator, AraC family2e-1996.3
NC_012881:1062629:106437510643751065232858Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, AraC family1e-1894
NC_016944:168530:197883197883198695813Vibrio cholerae IEC224 chromosome I, complete sequenceAraC/XylS family transcriptional regulator4e-1892
NC_002505:168532:197873197873198685813Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family4e-1892
NC_016445:2593800:262314126231412623944804Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeAraC/XylS family transcriptional regulator4e-1892
NC_014844:762794:781918781918782757840Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAraC type helix-turn-helix- domain-containing protein7e-1891.3
NC_010552:1212000:123064912306491231497849Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, AraC family8e-1787.8
NC_020291:552104:571737571737572579843Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, AraC family2e-1686.3
NC_015589:38418:583045830459131828Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix- domain-containing protein AraC type1e-1584
NC_016047:345491:350438350438351265828Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeAraC/XylS family transcriptional regulator2e-1582.8
NC_013131:7437831:744729274472927448035744Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, AraC family7e-1581.3
NC_014624:2569604:257139625713962572262867Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-1480.1
NC_016633:541559:555866555866556687822Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA-binding domain-containing protein2e-1479.7
NC_010501:3013103:301614130161413016962822Pseudomonas putida W619, complete genometranscriptional regulator, AraC family7e-1477.8
NC_008751:607209:607209607209608048840Desulfovibrio vulgaris subsp. vulgaris DP4, complete genometranscriptional regulator, AraC family2e-1376.6
NC_020291:552104:552104552104552973870Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeAraC-type sugar metabolism regulator2e-1376.3
NC_010681:1234500:125237712523771253267891Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family4e-1375.1
NC_015957:7249873:725992672599267260753828Streptomyces violaceusniger Tu 4113 chromosome, complete genomeAraC family transcriptional regulator2e-1273.2
NC_010681:1234500:125113612511361252074939Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, AraC family4e-1272
NC_013720:5769910:577557757755775776428852Pirellula staleyi DSM 6068, complete genometranscriptional regulator, AraC family4e-1272
NC_002947:3404000:340862234086223409431810Pseudomonas putida KT2440, complete genometranscriptional regulator, AraC family4e-1272
NC_006322:203932:227318227318227626309Bacillus licheniformis ATCC 14580, complete genomeYbfI15e-1168.6
NC_008027:2397255:2419669241966924206761008Pseudomonas entomophila L48, complete genometranscriptional regulator, AraC family1e-1067.4
NC_016002:1326500:134962213496221350446825Pseudogulbenkiania sp. NH8B, complete genomeAraC family transcriptional regulator4e-1065.5
NC_004129:3452885:348470734847073485513807Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family5e-1065.1
NC_003295:2787371:280237428023742803273900Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-1065.1
NC_010322:3315024:332559533255953325978384Pseudomonas putida GB-1 chromosome, complete genomeAraC family transcriptional regulator8e-1064.3
NC_014100:449541:469746469746470255510Caulobacter segnis ATCC 21756 chromosome, complete genomeAraC family transcriptional regulator1e-0963.9
NC_009436:2056000:206845420684542069380927Enterobacter sp. 638, complete genomeAraC family transcriptional regulator2e-0963.2
NC_009348:2362163:238571223857122386632921Aeromonas salmonicida subsp. salmonicida A449, complete genomeAraC family transcriptional regulator2e-0963.2
NC_016818:3887000:392219039221903922996807Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeDNA-binding domain-containing protein2e-0962.8
NC_015733:2963548:297143729714372971889453Pseudomonas putida S16 chromosome, complete genomeAraC family transcriptional regulator2e-0962.8
NC_009952:2381601:240977624097762410660885Dinoroseobacter shibae DFL 12, complete genomeputative transcriptional regulator3e-0962.8
NC_016631:3245501:325872632587263259574849Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator3e-0962.8
NC_017986:5509569:551342855134285514114687Pseudomonas putida ND6 chromosome, complete genomeAraC family transcriptional regulator3e-0962.4
NC_016631:6081384:609364760936476094531885Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator4e-0962
NC_016584:487613:499304499304500050747Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator5e-0961.6
NC_016078:3130573:313274431327443133640897Pelagibacterium halotolerans B2 chromosome, complete genomeAraC family transcriptional regulator7e-0961.2
NC_014963:2759978:277227027722702773157888Terriglobus saanensis SP1PR4 chromosome, complete genomeAraC family transcriptional regulator9e-0960.8
NC_009486:1737703:174171917417191742618900Thermotoga petrophila RKU-1 chromosome, complete genomeAraC-like transcriptional regulator1e-0860.5
NC_020064:2299950:230477223047722305650879Serratia marcescens FGI94, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain1e-0860.5
NC_016935:4117485:418696441869644187827864Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_015690:4361000:442089344208934421756864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0860.1
NC_016627:1485799:152182415218241522717894Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-binding domain-containing protein2e-0859.7
NC_011898:1218500:125783612578361258660825Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family2e-0859.7
NC_015379:4426827:4437720443772044387331014Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family3e-0859.3
NC_016078:3130573:313408031340803134979900Pelagibacterium halotolerans B2 chromosome, complete genomeAraC family transcriptional regulator3e-0859.3
NC_015186:2197236:221069822106982211576879Acidiphilium multivorum AIU301, complete genomeAraC family transcriptional regulator3e-0858.9
NC_013406:4478000:448353744835374484400864Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator3e-0858.9
NC_008686:1439328:1461579146157914625801002Paracoccus denitrificans PD1222 chromosome 1, complete sequencehelix-turn-helix- domain containing protein, AraC type4e-0858.9
NC_015723:280368:291558291558292412855Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator9e-0857.8
NC_008740:3259962:327391832739183274850933Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type8e-0857.8
NC_019973:2417000:2437006243700624381151110Mesorhizobium australicum WSM2073, complete genomeDNA-binding domain-containing protein, AraC-type7e-0857.8
NC_013406:3672857:3709192370919237107811590Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator9e-0857.4
NC_020453:7826358:785191078519107852845936Agromonas oligotrophica S58 DNA, complete genomeAraC family transcriptional regulator1e-0757.4
NC_014923:2439197:246013724601372461012876Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix- domain containing protein AraC type1e-0757.4
NC_013132:3877500:390580239058023906800999Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family1e-0757.4
NC_012914:5225609:522799552279955228879885Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family1e-0757
NC_015065:162317:202038202038202922885Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencetranscriptional regulator, AraC family2e-0756.6
NC_012660:2431803:2447234244723424482471014Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein2e-0756.2
NC_014973:243000:247572247572248330759Geobacter sp. M18 chromosome, complete genometwo component AraC family transcriptional regulator3e-0755.8
NC_016776:2549465:256302525630252563837813Bacteroides fragilis 638R, complete genomeAraC family transcriptional regulator3e-0755.8
NC_011593:1830500:184190718419071842767861Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transcription activator, effector binding5e-0755.1
NC_017218:1166844:117820011782001179060861Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomebacterial transcription activator, effector-binding domain protein5e-0755.1
NC_017219:1830353:184169718416971842557861Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator5e-0755.1
NC_015675:2567000:258730225873022588210909Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator5e-0755.1
NC_004547:843475:846356846356847111756Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator5e-0755.1
NC_012914:4238142:4262602426260242636721071Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family5e-0755.1
NC_008573:195317:224184224184225119936Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, AraC family7e-0754.7
NC_014933:1759729:178259217825921783479888Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, AraC family7e-0754.7
NC_014008:669170:679249679249680019771Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, AraC family7e-0754.7
NC_013204:1759985:1771263177126317723001038Eggerthella lenta DSM 2243, complete genometranscriptional regulator, AraC family9e-0754.3
NC_011000:1216430:1245111124511112464931383Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein9e-0754.3
NC_010515:1428664:1432829143282914341691341Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, AraC family8e-0754.3
NC_003228:2473956:248823224882322489044813Bacteroides fragilis NCTC 9343, complete genomeputative AraC family transcriptional regulatory protein8e-0754.3
NC_014311:1888686:190829219082921909203912Ralstonia solanacearum PSI07 chromosome, complete genomearaC-type DNA-binding transcriptional regulator8e-0754.3
NC_009512:2108686:212945721294572129837381Pseudomonas putida F1, complete genomehelix-turn-helix- domain containing protein, AraC type1e-0653.9
NC_012214:2019000:203667520366752037016342Erwinia pyrifoliae Ep1/96, complete genomeTranscriptional regulator, AraC family1e-0653.9
NC_015957:1070500:109744310974431098348906Streptomyces violaceusniger Tu 4113 chromosome, complete genomeAraC family transcriptional regulator2e-0653.5
NC_016935:4367000:437787743778774378845969Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator1e-0653.5
NC_016935:4367000:440287544028754403759885Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_011071:1877500:189908918990891900039951Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, AraC family2e-0653.1
NC_020063:3352516:335776133577613358105345Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain2e-0653.1
NC_009092:2282437:229102922910292291928900Shewanella loihica PV-4, complete genometranscriptional regulator, AraC family3e-0652.8
NC_009648:1882500:188609218860921887006915Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein2e-0652.8
NC_016845:2655512:266169226616922662606915Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ARAC-type regulatory protein2e-0652.8
NC_012731:2302974:233146423314642332342879Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeAraC family transcriptional regulator4e-0652.4
NC_015675:6493444:6508665650866565097441080Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator5e-0652
NC_014923:5940500:5953994595399459550731080Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix- domain containing protein AraC type5e-0652
NC_019973:5869500:5882954588295458840331080Mesorhizobium australicum WSM2073, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain5e-0652
NC_000911:15937:206152061521595981Synechocystis sp. PCC 6803, complete genomeregulatory protein; PchR4e-0652
NC_017039:15937:206152061521595981Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeregulatory protein PchR4e-0652
NC_017052:15937:206152061521595981Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeregulatory protein PchR4e-0652
NC_017277:15937:206152061521595981Synechocystis sp. PCC 6803, complete genomeregulatory protein PchR4e-0652
NC_021150:3505234:352654635265463527520975Azotobacter vinelandii CA6, complete genomeArgR-like transcriptional regulator, AraC family4e-0652
NC_012560:3505235:352654735265473527521975Azotobacter vinelandii DJ, complete genomeArgR-like transcriptional regulator, AraC family4e-0652
NC_011751:1770376:179158517915851791839255Escherichia coli UMN026 chromosome, complete genomeputative HTH-type transcriptional regulator yqhC (fragment)4e-0652
NC_010338:426388:446357446357447268912Caulobacter sp. K31, complete genometranscriptional regulator, AraC family6e-0651.6
NC_013729:2157785:216172921617292162526798Kribbella flavida DSM 17836, complete genometranscriptional regulator, AraC family5e-0651.6
NC_010501:3448389:347064834706483471556909Pseudomonas putida W619, complete genometranscriptional regulator, AraC family7e-0651.2
NC_015410:2258800:228399222839922284939948Pseudomonas mendocina NK-01 chromosome, complete genomeAraC family transcriptional regulator7e-0651.2
NC_014541:1617678:163751416375141638503990Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family7e-0651.2
NC_014258:355845:375318375318376244927Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional Activator RhaS8e-0651.2
NC_020410:3868573:389264338926433893224582Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completemethylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family)8e-0651.2
NC_007509:1383013:1387020138702013880361017Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, AraC family8e-0651.2