Pre_GI: BLASTP Hits

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Query: NC_016445:2012294:2019799 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2019799, End: 2020770, Length: 972

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:1036000:104405310440531045024972Vibrio cholerae MJ-1236 chromosome 1, complete sequencereverse transcriptase0656
NC_012582:2626786:263429426342942635265972Vibrio cholerae O395 chromosome chromosome I, complete sequenceRNA-directed DNA polymerase0656
NC_012578:2479150:248665824866582487629972Vibrio cholerae M66-2 chromosome I, complete sequenceRNA-directed DNA polymerase0656
NC_009457:2095366:210287421028742103845972Vibrio cholerae O395 chromosome 2, complete sequenceRNA-directed DNA polymerase0656
NC_002505:2537655:254964225496422550613972Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA-directed DNA polymerase0656
NC_016944:2588435:259596425959642596911948Vibrio cholerae IEC224 chromosome I, complete sequenceRNA-directed DNA polymerase0640
NC_014837:33014:4546245462464751014Pantoea sp. At-9b chromosome, complete genomeRNA-directed DNA polymerase7e-76284
NC_015663:1356982:1366981136698113679971017Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA-directed DNA polymerase2e-74279
NC_008570:2216736:224228322422832243191909Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative RNA-dependent DNA polymerase6e-72271
NC_015976:2900891:291120929112092912144936Sphingobium sp. SYK-6, complete genomeputative RNA-directed DNA polymerase3e-46186
NC_013456:2984491:298688029868802987845966Vibrio sp. Ex25 chromosome 1, complete genomeputative reverse transcriptase5e-46184
NC_011206:262844:277816277816278763948Acidithiobacillus ferrooxidans ATCC 53993, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)8e-42171
NC_016620:781995:784689784689785654966Bacteriovorax marinus SJ, complete genomereverse transcriptase5e-27122
NC_009659:892272:9039629039629049751014Janthinobacterium sp. Marseille chromosome, complete genomeRNA-directed DNA polymerase7e-24111
NC_017191:3901914:3912193391219339139561764Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA-directed DNA polymerase4e-23108
NC_017188:3900951:3910501391050139122641764Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA-directed DNA polymerase4e-23108
NC_002516:776787:785969785969786925957Pseudomonas aeruginosa PAO1, complete genomehypothetical protein6e-23108
NC_015510:4674774:4680972468097246832302259Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeRNA-directed DNA polymerase7e-21101
NC_011601:4036590:406150440615044062463960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeRNA-directed DNA polymerase2e-20100
NC_011750:4307166:4329863432986343310261164Escherichia coli IAI39 chromosome, complete genomeputative retron-type reverse transcriptase1e-1997.8
NC_003911:1078949:109420510942051095173969Silicibacter pomeroyi DSS-3, complete genomeRNA-dependent DNA polymerase, putative1e-1997.1
NC_013406:303218:3125503125503142201671Paenibacillus sp. Y412MC10 chromosome, complete genomeRNA-directed DNA polymerase2e-1997.1
NC_010688:3030873:306024630602463061202957Xanthomonas campestris pv. campestris, complete genomeputative reverse transcriptase2e-1997.1
NC_009973:178000:2176542176542194081755Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeRNA-directed DNA polymerase3e-1996.3
NC_002939:1480474:1491977149197714931191143Geobacter sulfurreducens PCA, complete genomeRNA-directed DNA polymerase9e-1994.4
NC_020418:2868000:2883180288318028849131734Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-1893.2
NC_012947:2898179:290244829024482903410963Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRNA-directed DNA polymerase9e-1891.3
NC_018012:1789028:180004918000491801002954Thiocystis violascens DSM 198 chromosome, complete genomeRetron-type reverse transcriptase9e-1891.3
NC_015164:2473496:2477601247760124790611461Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase1e-1790.9
NC_010334:609636:6242056242056253471143Shewanella halifaxensis HAW-EB4, complete genomeRNA-directed DNA polymerase4e-1789
NC_013194:634039:6422706422706439851716Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRibonuclease H4e-1789
NC_011883:2826000:2832835283283528346191785Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,RNA-directed DNA polymerase4e-1789
NC_021066:3201500:321332732133273214196870Raoultella ornithinolytica B6, complete genomehypothetical protein9e-1787.8
NC_007347:1:687068707844975Ralstonia eutropha JMP134 chromosome 1, complete sequenceRNA-directed DNA polymerase2e-1686.7
NC_016818:1795576:1804158180415818059991842Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completereverse transcriptase3e-1686.3
NC_013440:1190832:1204684120468412063901707Haliangium ochraceum DSM 14365, complete genomeRibonuclease H3e-1686.3
NC_012880:2778795:278747227874722788422951Dickeya dadantii Ech703, complete genomereverse transcriptase4e-1685.9
NC_016026:2082500:2097240209724020990481809Micavibrio aeruginosavorus ARL-13 chromosome, complete genomereverse transcriptase family protein8e-1684.7
NC_010688:673454:6822916822916839851695Xanthomonas campestris pv. campestris, complete genomeRNA-directed DNA polymerase3e-1582.8
NC_015635:5222000:523243052324305233401972Microlunatus phosphovorus NM-1, complete genomeputative RNA-directed DNA polymerase4e-1582.4
NC_012691:779826:7885707885707896011032Tolumonas auensis DSM 9187, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-1581.6
NC_008313:2685531:270267527026752703667993Ralstonia eutropha H16 chromosome 1, complete sequencereverse transcriptase (RNA-dependent DNA polymerase)9e-1581.3
NC_015496:3256372:3267584326758432686031020Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA-directed DNA polymerase3e-1479.3
NC_010334:609636:620220620220621074855Shewanella halifaxensis HAW-EB4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-1479
NC_006513:286549:2939752939752958941920Azoarcus sp. EbN1, complete genomeprobable RNA-directed DNA polymerase2e-1377
NC_007645:6858465:6858465685846568597991335Hahella chejuensis KCTC 2396, complete genomeRetron-type reverse transcriptase4e-1375.9
NC_020304:3029243:303402230340223034798777Desulfocapsa sulfexigens DSM 10523, complete genomeRetron-type reverse transcriptase4e-1375.9
NC_014562:983398:997923997923998909987Pantoea vagans C9-1 chromosome, complete genomehypothetical protein5e-1375.5
NC_012918:928903:9532789532789544111134Geobacter sp. M21 chromosome, complete genomeRNA-directed DNA polymerase5e-1375.5
NC_007086:2887875:2939736293973629409231188Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA-directed DNA polymerase6e-1375.1
NC_012880:3982383:399147739914773992475999Dickeya dadantii Ech703, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-1274.3
NC_007606:3784847:380768838076883808197510Shigella dysenteriae Sd197, complete genomeputative RNA-directed DNA polymerase, msDNA specific5e-1272
NC_005139:1784000:1817712181771218188571146Vibrio vulnificus YJ016 chromosome I, complete sequenceretron-type reverse transcriptase1e-1171.2
NC_012108:2159230:217027321702732171157885Desulfobacterium autotrophicum HRM2, complete genomeRNA-directed DNA polymerase (retron-type reverse transcriptase)4e-1168.9
NC_009438:3019552:3031547303154730326981152Shewanella putrefaciens CN-32 chromosome, complete genomeretron-type reverse transcriptase5e-1168.6
NC_012660:2045398:2084638208463820857861149Pseudomonas fluorescens SBW25 chromosome, complete genomeputative RNA-directed DNA polymerase2e-1067
NC_015856:3059737:3068580306858030697581179Collimonas fungivorans Ter331 chromosome, complete genomeretron reverse transcriptase4e-1065.9
NC_013921:1977444:1977444197744419788561413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:2293411:2294928229492822963401413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:1396500:1396798139679813982101413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:1396500:1400425140042514018371413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_013921:80856:1000881000881015001413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1065.5
NC_015958:677500:6866716866716880831413Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRNA-directed DNA polymerase5e-1065.5
NC_010320:143109:1551031551031565151413Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase1e-0964.3
NC_014538:187747:1949691949691963811413Thermoanaerobacter sp. X513 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0964.3
NC_007645:4677965:4684237468423746856251389Hahella chejuensis KCTC 2396, complete genomegroup II intron-encoding maturase1e-0963.9
NC_015164:2961906:2984079298407929854161338Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0963.2
NC_016935:1636278:1636278163627816376691392Paenibacillus mucilaginosus 3016 chromosome, complete genomeRNA-directed DNA polymerase7e-0961.6
NC_013223:2609697:2610769261076926121691401Desulfohalobium retbaense DSM 5692, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-0961.6
NC_010981:242500:2849612849612863041344Wolbachia pipientis, complete genomeputative reverse transcriptase1e-0860.8
NC_014964:923681:9315429315429329541413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_014964:35862:4562345623470351413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_010321:35855:4561645616470281413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0860.8
NC_010321:2276000:2283171228317122845831413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase1e-0860.8
NC_019970:2080419:2095698209569820971041407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase1e-0860.8
NC_019970:2551607:2574597257459725760031407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase1e-0860.8
NC_019970:510632:5207095207095221151407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase1e-0860.8
NC_013851:3321853:3347636334763633489971362Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0860.1
NC_011060:1288862:1305353130535313065941242Pelodictyon phaeoclathratiforme BU-1, complete genomeRNA-directed DNA polymerase4e-0859.3
NC_002950:2068500:2069615206961520727103096Porphyromonas gingivalis W83, complete genomeCRISPR-associated protein Cas14e-0858.9
NC_019897:128610:1464991464991478901392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase4e-0858.9
NC_019978:1477724:1479685147968514809741290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase1e-0757.4
NC_019978:1477724:1477724147772414790131290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase1e-0757.4
NC_010321:2276000:228183622818362282342507Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeretron-type reverse transcriptase-like protein1e-0757.4
NC_019897:128610:1414831414831428741392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase2e-0756.6
NC_011751:2327014:2339420233942023405201101Escherichia coli UMN026 chromosome, complete genomeputative Retron-type reverse transcriptase3e-0756.2
NC_010337:616304:6364406364406375641125Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase family protein4e-0755.8
NC_004193:79588:8221182211834701260Oceanobacillus iheyensis HTE831, complete genomerecombinase for Bh.Int6e-0755.5
NC_011059:2272747:2285752228575222869931242Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-0755.5
NC_010729:2147268:2149419214941921517072289Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein6e-0755.5
NC_018645:2390032:2397530239753023988701341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.5
NC_018645:2390032:2405637240563724069771341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:2390032:2395599239559923969391341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:2390032:2393152239315223944921341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:3029785:3047408304740830487481341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1
NC_018645:2390032:2399461239946124008011341Desulfobacula toluolica Tol2, complete genomeRNA-directed DNA polymerase2e-0653.1