Pre_GI Gene

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Host: NC_012582 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012582:2626786 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
262678626282011416glutamate synthase small subunitQuickGO ontologyBLASTP
26283882628822435hypothetical proteinBLASTP
26289102629605696MTASAH nucleosidaseQuickGO ontologyBLASTP
26296182630571954putative cobalamin biosynthesis protein CbiBQuickGO ontologyBLASTP
26305722631402831Vitamin B12-binding protein precursorQuickGO ontologyBLASTP
26313862632105720hypothetical proteinBLASTP
26322572633117861transcriptional regulator LysR familyQuickGO ontologyBLASTP
26330472633832786putative Inner membrane proteinQuickGO ontologyBLASTP
26342942635265972RNA-directed DNA polymeraseQuickGO ontologyBLASTP
26369002637517618hypothetical proteinBLASTP
26381292638611483hypothetical proteinBLASTP
263870126419313231carbamoyl-phosphate synthase large subunitQuickGO ontologyBLASTP
264194826430871140carbamoyl-phosphate synthase small subunitQuickGO ontologyBLASTP
26435702644379810dihydrodipicolinate reductaseQuickGO ontologyBLASTP
26444942644892399mutator MutT proteinQuickGO ontologyBLASTP
26448782645045168hypothetical proteinBLASTP
264504226477532712preprotein translocase SecA subunitQuickGO ontologyBLASTP
26481072648580474hypothetical proteinBLASTP
26486852649602918UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylaseQuickGO ontologyBLASTP