Pre_GI Gene

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Host: NC_009457 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009457:2095366 Vibrio cholerae O395 chromosome 2, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
209536620967811416glutamate synthase subunit betaQuickGO ontologyBLASTP
20969682097402435hypothetical proteinBLASTP
209749020981856965-methylthioadenosineS-adenosylhomocysteine nucleosidaseQuickGO ontologyBLASTP
20981982099151954adenosylcobinamide-phosphate synthaseQuickGO ontologyBLASTP
20991522099982831hypothetical proteinBLASTP
21000652100685621hypothetical proteinBLASTP
21016272102412786hypothetical proteinBLASTP
21028742103845972RNA-directed DNA polymeraseQuickGO ontologyBLASTP
21038462104643798hypothetical proteinBLASTP
21048562105467612hypothetical proteinBLASTP
21062022106348147hypothetical proteinBLASTP
21067092107191483hypothetical proteinBLASTP
210728121105113231carbamoyl phosphate synthase large subunitQuickGO ontologyBLASTP
211052821116671140carbamoyl phosphate synthase small subunitQuickGO ontologyBLASTP
21119342112062129hypothetical proteinBLASTP
21121502112959810dihydrodipicolinate reductaseQuickGO ontologyBLASTP
21130742113472399mutator MutT proteinQuickGO ontologyBLASTP
211362221163332712preprotein translocase subunit SecAQuickGO ontologyBLASTP