Pre_GI: BLASTP Hits

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Query: NC_015848:2684275:2696301 Mycobacterium canettii CIPT 140010059, complete genome

Start: 2696301, End: 2698148, Length: 1848

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016768:1769332:1774055177405517759021848Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein4e-62239
NC_009525:2635792:2649656264965626515031848Mycobacterium tuberculosis H37Ra, complete genomePPE family protein4e-62239
NC_012943:1769445:1774168177416817760151848Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein5e-62239
NC_010612:4501414:4513819451381945157441926Mycobacterium marinum M, complete genomePPE family protein1e-43178
NC_015848:2684275:2693696269369626955191824Mycobacterium canettii CIPT 140010059, complete genomeppe family protein4e-21103
NC_016768:1769332:1776640177664017785081869Mycobacterium tuberculosis KZN 4207 chromosome, complete genomePPE family protein5e-21103
NC_012943:1769445:1776753177675317786211869Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein5e-21103
NC_012207:2573562:2595923259592325973291407Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein1e-1998.6
NC_009525:2635792:2646496264649626475601065Mycobacterium tuberculosis H37Ra, complete genomePPE family protein2e-1997.8
NC_010612:4501414:4511619451161945135291911Mycobacterium marinum M, complete genomePPE family protein8e-1995.9
NC_010612:5301135:5316112531611253179771866Mycobacterium marinum M, complete genomePPE family protein1e-1481.6
NC_020133:5710661:5722718572271857243311614Mycobacterium liflandii 128FXT, complete genomePPE family protein6e-1376.6
NC_010612:6113155:6127439612743961290521614Mycobacterium marinum M, complete genomePPE family protein6e-1376.6
NC_010612:5301135:5318444531844453217643321Mycobacterium marinum M, complete genomePPE family protein2e-1275.1
NC_020133:4911044:4931566493156649342052640Mycobacterium liflandii 128FXT, complete genome2e-0964.7
NC_010612:5653031:5659834565983456688549021Mycobacterium marinum M, complete genomePPE family protein3e-0964.3
NC_012943:830000:8493018493018512411941Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePPE family protein2e-0964.3
NC_016768:830000:8493058493058512451941Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-0964.3
NC_002945:831029:8502938502938522301938Mycobacterium bovis AF2122/97, complete genomePPE family protein2e-0964.3
NC_012207:831030:8502468502468521831938Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein2e-0964.3
NC_017026:829444:8494948494948505491056Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein1e-0862
NC_002945:3429315:3444248344424834454231176Mycobacterium bovis AF2122/97, complete genomePPE family protein3e-0757.8
NC_002755:3465582:3486273348627334874481176Mycobacterium tuberculosis CDC1551, complete genomePPE family protein2e-0757.8
NC_009565:3485772:3503599350359935047741176Mycobacterium tuberculosis F11, complete genomePPE family protein2e-0757.8
NC_000962:3474000:3490476349047634916511176Mycobacterium tuberculosis H37Rv, complete genomePPE FAMILY PROTEIN2e-0757.8
NC_009525:3484924:3502632350263235038071176Mycobacterium tuberculosis H37Ra, complete genomePPE family protein2e-0757.8
NC_017026:3466809:3484534348453434857091176Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein2e-0757.8
NC_016804:3407859:342187834218783422726849Mycobacterium bovis BCG str. Mexico chromosome, complete genomePPE family protein3e-0757.4
NC_008769:3427254:344251334425133443361849Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePPE family protein3e-0757.4
NC_012207:3421144:343516334351633436011849Mycobacterium bovis BCG str. Tokyo 172, complete genomePPE family protein3e-0757.4
NC_017026:829444:848605848605849483879Mycobacterium tuberculosis RGTB327 chromosome, complete genomePPE family protein2e-0654.7