Pre_GI: BLASTP Hits

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Query: NC_015733:864959:878238 Pseudomonas putida S16 chromosome, complete genome

Start: 878238, End: 878831, Length: 594

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:819381:832535832535833137603Pseudomonas fluorescens SBW25 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc3e-89327
NC_020209:47504:108771108771109382612Pseudomonas poae RE*1-1-14, complete genome50S ribosomal protein L25/general stress protein Ctc2e-80298
NC_004578:1190000:121776012177601218371612Pseudomonas syringae pv. tomato str. DC3000, complete genome50S ribosomal protein L253e-79293
NC_009434:3434381:343543034354303436047618Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L25/general stress protein Ctc5e-74276
NC_009656:5475540:547996554799655480579615Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc1e-71268
NC_009439:1174432:119176011917601192365606Pseudomonas mendocina ymp, complete genome50S ribosomal protein L25/general stress protein Ctc3e-69260
NC_015410:1202370:121752812175281218142615Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc4e-62237
NC_012968:2000218:200232320023232002931609Methylotenera mobilis JLW8, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-46183
NC_010995:764567:781312781312781923612Cellvibrio japonicus Ueda107, complete genomeribosomal protein L25, Ctc-form1e-44179
NC_012969:2136243:214182921418292142446618Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL52e-43175
NC_014733:2095996:210375921037592104376618Methylovorus sp. MP688 chromosome, complete genomeribosomal 5S rRNA e-loop binding protein ctc/l25/tl52e-43175
NC_016112:3840053:388179238817923882412621Methylomicrobium alcaliphilum chromosome, complete genome50S ribosomal protein L257e-42170
NC_015731:3658956:366175736617573662380624Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L255e-41167
NC_015572:4209000:424572442457244246338615Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L251e-39162
NC_017033:678321:679438679438680076639Frateuria aurantia DSM 6220 chromosome, complete genome50S ribosomal protein L255e-39160
NC_010170:4196197:422510142251014225724624Bordetella petrii, complete genome50S ribosomal protein L252e-32138
NC_010084:534937:560996560996561601606Burkholderia multivorans ATCC 17616 chromosome 1, complete50S ribosomal protein L25/general stress protein Ctc7e-30130
NC_010804:2960352:296317229631722963777606Burkholderia multivorans ATCC 17616 chromosome 1, completelarge subunit ribosomal protein L257e-30130
NC_002927:960369:962550962550963164615Bordetella bronchiseptica RB50, complete genome50S ribosomal protein L251e-29129
NC_002929:3305682:332869933286993329325627Bordetella pertussis Tohama I, complete genome50S ribosomal protein L259e-30129
NC_017223:3345902:336891933689193369545627Bordetella pertussis CS chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc9e-30129
NC_010645:558974:560020560020560616597Bordetella avium 197N, complete genome50S ribosomal protein L25/general stress protein Ctc2e-29128
NC_007643:4294818:429481842948184295450633Rhodospirillum rubrum ATCC 11170, complete genomeRibosomal protein L255e-27120
NC_010725:2589014:261462726146272615313687Methylobacterium populi BJ001, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL57e-27120
NC_015573:162000:165573165573166208636Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome50S ribosomal protein L255e-23107
NC_016111:2257166:226529822652982265885588Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L252e-22105
NC_013929:6008072:601228160122816012877597Streptomyces scabiei 87.22 chromosome, complete genome50S ribosomal protein L252e-2098.6
NC_010571:2943369:294772029477202948538819Opitutus terrae PB90-1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-2098.2
NC_013947:1363078:137016713701671370784618Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-2097.4
NC_014654:2180994:220285322028532203533681Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL58e-2096.7
NC_010814:2758902:278068427806842781268585Geobacter lovleyi SZ, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1891.7
NC_009664:1195630:121492912149291215558630Kineococcus radiotolerans SRS30216, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1891.7
NC_002937:1634287:165667516566751657247573Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeribosomal protein L252e-1788.6
NC_008710:819389:831188831188831736549Borrelia turicatae 91E135, complete genomeLSU ribosomal protein L25P3e-1788.2
NC_017094:828836:839914839914840516603Leptospirillum ferrooxidans C2-3, complete genome50S ribosomal protein L254e-1787.8
NC_006177:2398482:245348424534842454101618Symbiobacterium thermophilum IAM 14863, complete genome50S ribosomal protein L257e-1787
NC_019978:91483:103069103069103725657Halobacteroides halobius DSM 5150, complete genomeribosomal protein L25, Ctc-form8e-1786.7
NC_014168:471000:489658489658490287630Segniliparus rotundus DSM 44985 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-1685.9
NC_012918:1697860:172822217282221728815594Geobacter sp. M21 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc2e-1685.9
NC_009922:42696:489964899649571576Alkaliphilus oremlandii OhILAs, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1685.1
NC_016114:4333390:433740443374044337991588Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL53e-1685.1
NC_009617:1165539:117622811762281176797570Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL57e-1683.6
NC_016629:2971860:297827829782782978901624Desulfovibrio africanus str. Walvis Bay chromosome, complete50S ribosomal protein L252e-1582
NC_009828:469778:482203482203482853651Thermotoga lettingae TMO, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL56e-1580.9
NC_013171:1194500:121332512133251213978654Anaerococcus prevotii DSM 20548, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL56e-1580.5
NC_013971:2408522:241129624112962411580285Erwinia amylovora ATCC 49946 chromosome, complete genome50S ribosomal protein L256e-1580.5
NC_013961:2370994:237376823737682374052285Erwinia amylovora, complete genome50S ribosomal protein L256e-1580.5
NC_009053:553298:556776556776557063288Actinobacillus pleuropneumoniae L20, complete genome50S ribosomal protein L258e-1580.1
NC_012121:139741:152742152742153386645Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L258e-1580.1
NC_013715:1750403:176718117671811767840660Rothia mucilaginosa DY-18, complete genomeribosomal protein L251e-1479.7
NC_015501:868909:871186871186871821636Porphyromonas asaccharolytica DSM 20707 chromosome, complete50S ribosomal protein L251e-1479.3
NC_015566:3622385:362430436243043624588285Serratia sp. AS12 chromosome, complete genome50S ribosomal protein L252e-1479
NC_016816:1545354:157642915764291576713285Pantoea ananatis LMG 5342, complete genome50S ribosomal protein L253e-1478.6
NC_016012:879972:897032897032897625594Candidatus Arthromitus sp. SFB-rat-Yit, complete genome50S ribosomal protein L25/general stress protein Ctc1e-1376.6
NC_020064:3157656:316055131605513160835285Serratia marcescens FGI94, complete genomeribosomal protein L25 (general stress protein Ctc)1e-1376.3
NC_010516:3368951:337288633728863373422537Clostridium botulinum B1 str. Okra, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-1375.9
NC_020054:3501467:350632635063263506889564Fibrella aestuarina BUZ 2 drat genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-1375.5
NC_012658:3387774:339045033904503390986537Clostridium botulinum Ba4 str. 657 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc2e-1375.5
NC_009495:3309550:331226333122633312799537Clostridium botulinum A str. ATCC 3502 chromosome, complete genome50S ribosomal protein L253e-1375.1
NC_009698:3185359:318535931853593185895537Clostridium botulinum A str. Hall chromosome, complete genome50S ribosomal protein L253e-1375.1
NC_020419:1037899:104634610463461047065720Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, complete50S ribosomal protein L254e-1374.7
NS_000191:1037899:104634610463461047065720Uncultured Termite group 1 bacterium phylotype Rs-D17, complete50S ribosomal protein L254e-1374.7
NC_011027:858565:860211860211860816606Chlorobaculum parvum NCIB 8327, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL57e-1373.6
NC_006511:682863:704403704403704687285Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L257e-1373.6
NC_010102:683444:719092719092719376285Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1373.6
NC_011147:682897:704349704349704633285Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L257e-1373.6
NC_016863:2324293:232617823261782326462285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L257e-1373.6
NC_012917:1840172:188436018843601884644285Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeribosomal protein L251e-1273.2
NC_009718:643200:670458670458671117660Fervidobacterium nodosum Rt17-B1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-1273.2
NC_010067:660659:679844679844680128285Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1272.4
NC_004369:1051013:106982310698231070431609Corynebacterium efficiens YS-314, complete genome50S ribosomal protein L255e-1270.9
NC_014618:1593360:160859116085911608875285Enterobacter cloacae SCF1 chromosome, complete genome50S ribosomal protein L251e-1169.7
NC_013222:299683:370951370951371463513Robiginitalea biformata HTCC2501, complete genomeputative 50S ribosomal protein L251e-1169.7
NC_014218:1663486:166348616634861664067582Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-1169.7
NC_009615:363285:380854380854381438585Parabacteroides distasonis ATCC 8503 chromosome, complete genome50S ribosomal protein L251e-1066.2
NC_014643:1577021:157897215789721579268297Rothia dentocariosa ATCC 17931 chromosome, complete genomeribosomal L25p family protein4e-1064.7
NC_016893:694587:697886697886698176291Wigglesworthia glossinidia endosymbiont of Glossina morsitans50S ribosomal protein L253e-0858.2
NC_012673:77610:821268212682773648Exiguobacterium sp. AT1b, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL54e-0858.2
NC_009922:42696:481964819648789594Alkaliphilus oremlandii OhILAs, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-0755.8
NC_009850:628024:645702645702646238537Arcobacter butzleri RM4018, complete genome50S ribosomal protein L254e-0754.7
NC_003366:2143173:214505621450562145667612Clostridium perfringens str. 13, complete genomeprobable general stress protein1e-0653.1
NC_017256:144854:144854144854145138285Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,50S ribosomal protein L253e-0651.6