Pre_GI Gene

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Host: NC_002937 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002937:1634287 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16340751634290216hypothetical proteinBLASTP
163428716366802394cysteine-rich domainiron-sulfur cluster-binding domain proteinQuickGO ontologyBLASTP
163675116394712721aldehyde oxidoreductaseQuickGO ontologyBLASTP
163959016406091020molybdopterin biosynthesis protein putativeQuickGO ontologyBLASTP
16408401641211372molybdenum-binding protein HTH domainQuickGO ontologyBLASTP
164127016441642895HAMP domain proteinQuickGO ontologyBLASTP
164441916475383120sensory box histidine kinaseresponse regulatorQuickGO ontologyBLASTP
16476701647948279hypothetical protein
1648221164829777tRNA-ArgQuickGO ontologyBLASTP
1648317164839377tRNA-ArgQuickGO ontologyBLASTP
1648426164850277tRNA-ArgQuickGO ontologyBLASTP
16486041648873270hypothetical protein
16489711649738768phosphoadenosine phosphosulfate reductase putativeQuickGO ontologyBLASTP
16497481649960213hypothetical proteinBLASTP
16501241650633510ferritinQuickGO ontologyBLASTP
165070616524421737pyruvate ferredoxin oxidoreductase alpha subunitQuickGO ontologyBLASTP
16524391653293855pyruvate ferredoxin oxidoreductase beta subunitQuickGO ontologyBLASTP
165374816549981251transcription termination factor RhoQuickGO ontologyBLASTP
16553251655840516transcriptional regulator CarD familyQuickGO ontologyBLASTP
16559551656560606peptidyl-tRNA hydrolaseQuickGO ontologyBLASTP
16566751657247573ribosomal protein L25QuickGO ontologyBLASTP
16572971658235939ribose-phosphate pyrophosphokinaseQuickGO ontologyBLASTP
1658278165835376tRNA-GlnQuickGO ontology
165835716592178614-diphosphocytidyl-2C-methyl-D-erythritol kinaseQuickGO ontologyBLASTP
16592141659759546ATP-dependent protease peptidase subunitQuickGO ontologyBLASTP