Pre_GI: BLASTP Hits

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Query: NC_015709:1459838:1485087 Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete

Start: 1485087, End: 1486001, Length: 915

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Country: United Kingdom; Isolation: Sick cider; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011365:502620:505292505292506218927Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator6e-109394
NC_010125:2295500:229847122984712299397927Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional Regulator, LysR family6e-109394
NC_011365:1865687:188826518882651889218954Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator3e-76285
NC_010125:1011430:101697210169721017925954Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family5e-76284
NC_016027:2512297:2523752252375225248161065Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator6e-75280
NC_020211:103371:126887126887127789903Serratia marcescens WW4, complete genomeLysR family transcriptional regulator8e-56217
NC_020181:1317647:131764713176471318570924Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, LysR family4e-44178
NC_010338:588000:591892591892592821930Caulobacter sp. K31, complete genometranscriptional regulator, LysR family2e-41169
NC_015138:272500:274941274941275930990Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-37157
NC_011365:1865687:189835118983511899322972Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator3e-37155
NC_011283:785973:800657800657801586930Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator4e-37155
NC_015957:7348269:739581873958187396717900Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLysR family transcriptional regulator2e-27123
NC_009664:63230:832028320284113912Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, LysR family9e-26117
NC_017986:5833819:583514258351425836062921Pseudomonas putida ND6 chromosome, complete genomeNahR5e-24111
NC_008781:2611702:262742326274232628379957Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family2e-22106
NC_021066:4177217:418936241893624190264903Raoultella ornithinolytica B6, complete genomeputative transcriptional regulator3e-21102
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family5e-21102
NC_008782:3252092:325901532590153259920906Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family8e-21101
NC_015711:3546500:356156035615603562501942Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcripitonal regulator2e-20100
NC_014641:20103:410434104341975933Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceHTH-type transcriptional activator NahR 32e-20100
NC_015424:2316228:231775323177532318688936Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator2e-1997.1
NC_007953:938346:945917945917946852936Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, LysR family2e-1996.7
NC_011000:2732330:279787027978702798769900Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein3e-1996.3
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 13e-1996.3
NC_012912:4167429:417109541710954172015921Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family3e-1995.9
NC_015376:903939:913862913862914785924Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, LysR family5e-1995.5
NC_015138:3160764:316968131696813170574894Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator6e-1994.7
NC_010943:1332243:133936213393621340264903Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator9e-1994.4
NC_007712:3629358:364621536462153646823609Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator8e-1994.4
NC_014217:4550544:458732945873294588243915Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, LysR family2e-1893.6
NC_015727:1357095:137833313783331379250918Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator2e-1893.6
NC_010505:2530476:2551319255131925523201002Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family6e-1891.7
NC_009524:861500:878447878447879355909Psychrobacter sp. PRwf-1 chromosome, complete genomeLysR family transcriptional regulator8e-1891.3
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family3e-1789.4
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator8e-1787.8
NC_008314:2611873:262641726264172627310894Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family2e-1686.7
NC_014013:112008:129080129080130036957Sphingobium japonicum UT26S chromosome 2, complete genomeLysR-family transcriptional regulator3e-1685.9
NC_013592:2338403:235105423510542351965912Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family3e-1685.9
NC_006569:370846:381777381777382751975Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LysR family3e-1685.9
NC_005140:340000:359000359000359944945Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator4e-1685.5
NC_014966:328056:347027347027347971945Vibrio vulnificus MO6-24/O chromosome II, complete sequencelysR-family transcriptional regulator4e-1685.5
NC_015663:3466471:348000034800003480920921Enterobacter aerogenes KCTC 2190 chromosome, complete genomeLysR family transcriptional regulator4e-1685.5
NC_017986:5467279:547918954791895480121933Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator4e-1685.5
NC_009512:3068495:307157930715793072511933Pseudomonas putida F1, complete genometranscriptional regulator, LysR family4e-1685.5
NC_004460:1618892:163372816337281634660933Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator, LysR family6e-1685.1
NC_015514:3307199:331702833170283317954927Cellulomonas fimi ATCC 484 chromosome, complete genomeLysR family transcriptional regulator8e-1684.7
NC_010625:1602191:162819216281921629166975Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family9e-1684.3
NC_010623:1961685:196825519682551969184930Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-1584
NC_009439:3535152:354860435486043549542939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-1584
NC_020209:1986503:200880320088032009744942Pseudomonas poae RE*1-1-14, complete genomeLysR family transcription regulator protein6e-1581.6
NC_013446:2961647:296904529690452969968924Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family1e-1480.9
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN1e-1480.9
NC_008061:2368517:239821323982132399139927Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-1480.9
NC_010557:679656:712468712468713370903Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family2e-1479.7
NC_008392:1029134:104404010440401044942903Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family2e-1479.7
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family2e-1479.7
NC_007511:3512100:353444735344473535373927Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-1479.7
NC_004463:2158116:218076621807662181758993Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein1e-1377
NC_015675:6615245:661844666184466619429984Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLysR family transcriptional regulator1e-1274.3
NC_014923:6060859:606377860637786064761984Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLysR substrate-binding protein1e-1274.3
NC_019973:5989816:599273559927355993718984Mesorhizobium australicum WSM2073, complete genometranscriptional regulator1e-1274.3
NC_016830:2642881:264642726464272647344918Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator2e-1273.6
NC_015379:4249238:426468542646854265602918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-1273.6
NC_013446:2919005:293064129306412931594954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family2e-1273.2
NC_016901:2070121:208311620831162084009894Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator2e-1273.2
NC_009997:2069894:208252920825292083422894Shewanella baltica OS195, complete genometranscriptional regulator, LysR family2e-1273.2
NC_004463:2158116:218239221823922183336945Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein3e-1272.8
NC_010529:296500:311314311314312246933Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNodD transcriptional regulator; lysR family4e-1272.4
NC_015514:3351052:335105233510523351984933Cellulomonas fimi ATCC 484 chromosome, complete genomeLysR family transcriptional regulator4e-1272.4
NC_017249:7993713:809553280955328096425894Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator5e-1272
NC_015733:2720183:273520827352082736122915Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator5e-1272
NC_009436:3807420:381830238183023819228927Enterobacter sp. 638, complete genomeLysR family transcriptional regulator5e-1272
NC_014641:20103:310553105531963909Achromobacter xylosoxidans A8 plasmid pA81, complete sequencebacterial regulatory helix-turn-helix protein, LysR family protein 2037e-1271.6
NC_010505:5035668:504944150494415050385945Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family7e-1271.2
NC_013446:2130021:214234221423422143295954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family2e-1170.5
NC_011894:4066926:409482740948274095753927Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family1e-1170.5
NC_007645:3756654:375780337578033758747945Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator2e-1170.1
NC_002947:4167500:417027541702754171180906Pseudomonas putida KT2440, complete genometranscriptional regulator, LysR family2e-1170.1
NC_011368:678291:683316683316684248933Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,LysR family transcriptional regulator2e-1169.7
NC_016830:1645879:166486316648631665786924Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator3e-1169.3
NC_018691:4619245:462260946226094623520912Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, LysR family3e-1169.3
NC_009439:2427120:243460724346072435509903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator4e-1168.9
NC_010511:4258000:427139842713984272324927Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator5e-1168.6
NC_015381:1705383:170681117068111707734924Burkholderia gladioli BSR3 chromosome 1, complete sequence7e-1168.2
NC_010524:4402478:442545844254584426423966Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family1e-1067.4
NC_011184:597496:615775615775616707933Vibrio fischeri MJ11 chromosome I, complete sequencetranscriptional regulator, LysR family2e-1066.6
NC_007952:3196085:322589732258973226814918Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, LysR family4e-1065.9
NC_011000:3362382:337903133790313379969939Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein4e-1065.5
NC_009937:311242:314202314202315176975Azorhizobium caulinodans ORS 571, complete genomeputative transcriptional regulator8e-1064.7
NC_014623:1883259:189844618984461899354909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_009431:40917:4091740917424371521Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein2e-0963.2
NC_018678:87064:107354107354108277924Alteromonas macleodii str. 'English Channel 673' chromosome,LysR family transcriptional regulator4e-0962.4
NC_016830:3230939:325379932537993254713915Pseudomonas fluorescens F113 chromosome, complete genomeprotein MexT4e-0962
NC_015379:3736500:373842937384293739343915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family6e-0961.6
NC_014012:1421979:142218014221801423097918Shewanella violacea DSS12, complete genometranscriptional regulator, LysR family9e-0961.2
NC_010172:5036385:504634750463475047306960Methylobacterium extorquens PA1, complete genomeLysR substrate-binding1e-0860.5
NC_009512:3251545:327571832757183276020303Pseudomonas putida F1, complete genometranscriptional regulator, LysR family3e-0859.3
NC_009439:1297851:130384013038401304802963Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator4e-0858.9
NC_015376:2241000:225434222543422255334993Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator MexT4e-0858.9
NC_008392:1029134:106160010616001062565966Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family6e-0858.5
NC_014310:845527:859898859898860788891Ralstonia solanacearum PSI07 megaplasmid, complete sequenceLysR family transcriptional regulator1e-0757.8
NC_012988:5516872:553280755328075533766960Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator1e-0757.4
NC_015968:2195645:222627322262732227205933Enterobacter asburiae LF7a chromosome, complete genomeLysR family transcriptional regulator4e-0755.5
NC_016612:361417:367772367772368695924Klebsiella oxytoca KCTC 1686 chromosome, complete genomeDNA-binding transcriptional regulator LysR4e-0755.5
NC_012796:3374911:338169533816953382615921Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-0755.5
NC_014121:2090630:210224621022462103172927Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacterial regulatory protein, LysR9e-0754.3
NC_016027:54305:740007400074281282Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator1e-0654.3
NC_007511:3512100:352254135225413523473933Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-0653.1