Pre_GI: BLASTP Hits

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Query: NC_014313:2059933:2059933 Hyphomicrobium denitrificans ATCC 51888 chromosome, complete

Start: 2059933, End: 2061204, Length: 1272

Host Lineage: Hyphomicrobium denitrificans; Hyphomicrobium; Hyphomicrobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environment: Fresh water; Temp: Mesophile. An aerobic, motile Gram-negative bacterium. Hyphomicrobium denitrificans has a biphasic life style, which consists of a motile phase of flagellated swarmer cells, and a cessile phase in which a long prosthecate is produced at one end of the bacteria through which budding cells emerge. Newly budded cells in turn produce flagella and go through a motile phase and the cycle continues. These organisms can colonize the surfaces of marine environments which enables additional species to colonize at later stages. This organism is also able to utilize methanol as a sole source of energy.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3823347:3836293383629338375461254Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-38159
NC_011745:3197584:3210529321052932117821254Escherichia coli ED1a chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-38159
NC_011742:3057444:3070072307007230713251254Escherichia coli S88 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-38159
NC_008253:2965573:2978391297839129796441254Escherichia coli 536, complete genomeputative amidase5e-38159
NC_010498:3023442:3036388303638830376411254Escherichia coli SMS-3-5, complete genomeN-acetylmuramoyl-L-alanine amidase AmiC5e-38159
NC_007946:3125577:3138193313819331395361344Escherichia coli UTI89, complete genomeN-acetylmuramoyl-L-alanine amidase AmiC precursor7e-38158
NC_007613:2699500:2710491271049127118341344Shigella boydii Sb227, complete genomeputative amidase7e-38158
NC_009654:2958316:2979555297955529808831329Marinomonas sp. MWYL1, complete genomeN-acetylmuramoyl-L-alanine amidase3e-26120
NC_015276:2804874:2819148281914828204761329Marinomonas mediterranea MMB-1 chromosome, complete genomecell wall hydrolase/autolysin4e-26119
NC_007298:3271071:3293633329363332949821350Dechloromonas aromatica RCB, complete genomeCell wall hydrolase/autolysin1e-25118
NC_004741:2526421:252642125264212527290870Shigella flexneri 2a str. 2457T, complete genomeN-acetylmuramoyl-l-alanine amidase I2e-25117
NC_004337:2548288:254828825482882549157870Shigella flexneri 2a str. 301, complete genomeN-acetylmuramoyl-l-alanine amidase I2e-25117
NC_008095:4669947:4670944467094446727431800Myxococcus xanthus DK 1622, complete genomeN-acetylmuramoyl-L-alanine amidase domain protein2e-23110
NC_015966:2337833:2358239235823923594591221Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomecell wall hydrolase/autolysin4e-23109
NC_014973:1941500:1960295196029519615721278Geobacter sp. M18 chromosome, complete genomecell wall hydrolase/autolysin3e-22106
NC_011146:1998981:2017847201784720191061260Geobacter bemidjiensis Bem, complete genomecell wall hydrolase/autolysin2e-21103
NC_014909:86000:8711587115884791365Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-20101
NC_014500:4257145:4257145425714542588211677Dickeya dadantii 3937 chromosome, complete genomeN-acetylmuramoyl-l-alanine amidase II1e-20101
NC_013416:875758:8803218803218818081488Aggregatibacter actinomycetemcomitans D11S-1, complete genomeN-acetylmuramoyl-L-alanine amidase4e-2099.4
NC_012691:2614603:2614603261460326161981596Tolumonas auensis DSM 9187, complete genomeN-acetylmuramoyl-L-alanine amidase8e-2098.6
NC_010519:1802294:1802294180229418035021209Haemophilus somnus 2336 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1998.2
NC_016513:1185241:1189805118980511912921488Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1997.4
NC_007604:2213659:2213659221365922147081050Synechococcus elongatus PCC 7942, complete genomeCell wall hydrolase/autolysin1e-1790.9
NC_014371:1358615:1369373136937313707041332Prevotella melaninogenica ATCC 25845 chromosome chromosome II,N-acetylmuramoyl-L-alanine amidase2e-1790.9
NC_016632:120500:1329301329301342761347Serratia symbiotica str. 'Cinara cedri' chromosome, completeN-acetylmuramoyl-l-alanine amidase II2e-1790.5
NC_005061:65861:8349183491847501260Candidatus Blochmannia floridanus, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1790.1
NC_004342:3370310:3393746339374633948371092Leptospira interrogans serovar Lai str. 56601 chromosome I,N-acetylmuramoyl-L-alanine amidase1e-1688.2
NC_016047:2480921:248393824839382484552615Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1687.4
NC_017328:2586171:258617125861712586794624Shigella flexneri 2002017 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase6e-1685.5
NC_019908:1043401:104251710425171043449933Brachyspira pilosicoli P43/6/78 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1584.7
NC_009698:3553365:355792635579263558630705Clostridium botulinum A str. Hall chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1584.3
NC_004557:2711702:272737227273722728097726Clostridium tetani E88, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-1584.3
NC_009706:238160:266605266605267321717Clostridium kluyveri DSM 555 chromosome, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase3e-1583.6
NC_009697:3659834:366081736608173661521705Clostridium botulinum A str. ATCC 19397 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1583.6
NC_011837:238160:266596266596267321726Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1583.2
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)6e-1582.4
NC_020126:2883194:288603228860322886841810Myxococcus stipitatus DSM 14675, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1582
NC_016751:1623756:1642310164231016436831374Marinitoga piezophila KA3 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1480.5
NC_015144:1526669:1526669152666915279791311Weeksella virosa DSM 16922 chromosome, complete genomecell wall hydrolase/autolysin3e-1480.1
NC_015555:2259500:2300952230095223023821431Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeN-acetylmuramoyl-L-alanine amidase6e-1479
NC_019970:2551607:2572748257274825741781431Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1376.6
NC_016593:868500:8686788686788700241347Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-acetylmuramoyl-L-alanine amidase6e-1375.9
NC_010723:223935:274089274089274751663Clostridium botulinum E3 str. Alaska E43, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD5e-1375.9
NC_009328:2905000:292383329238332924537705Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1274.7
NC_010424:1563033:1592155159215515944102256Candidatus Desulforudis audaxviator MP104C, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1273.2
NC_006156:685344:7058667058667068731008Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein5e-1272.8
NC_016584:1583685:1586858158685815880421185Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1272
NC_007760:3848190:387012238701223870871750Anaeromyxobacter dehalogenans 2CP-C, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1170.9
NC_008710:703740:7075257075257085501026Borrelia turicatae 91E135, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1170.1
NC_008255:1344674:134540813454081346205798Cytophaga hutchinsonii ATCC 33406, complete genomeN-acetylmuramoyl-L-alanine amidase I4e-1169.7
NC_003901:2727361:2729681272968127310541374Methanosarcina mazei Go1, complete genomecell surface protein5e-1169.3
NC_013921:1396500:140293514029351403645711Thermoanaerobacter italicus Ab9 chromosome, complete genomecell wall hydrolase/autolysin5e-1169.3
NC_015520:3060495:306407430640743064778705Mahella australiensis 50-1 BON chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1168.9
NC_011898:851892:866523866523867272750Clostridium cellulolyticum H10, complete genomecell wall hydrolase/autolysin2e-1067.8
NC_012926:727716:7307667307667335732808Streptococcus suis BM407 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1066.6
NC_009442:1216355:1234262123426212373693108Streptococcus suis 05ZYH33 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1066.6
NC_012925:1125876:1145568114556811486753108Streptococcus suis P1/7, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1066.6
NC_013316:120759:126866126866127618753Clostridium difficile R20291, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase4e-1066.2
NC_009089:117980:123166123166123870705Clostridium difficile 630, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase4e-1066.2
NC_010673:703816:7100877100877111121026Borrelia hermsii DAH, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1065.5
NC_014209:1910109:191010919101091910789681Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,N-acetylmuramoyl-L-alanine amidase CwlD1e-0965.1
NC_011768:1889853:190630319063031907115813Desulfatibacillum alkenivorans AK-01, complete genomecell wall hydrolase/autolysin2e-0964.3
NC_014915:2963500:297077229707722971452681Geobacillus sp. Y412MC52 chromosome, complete genomecell wall hydrolase/autolysin2e-0963.9
NC_013411:597235:632480632480633163684Geobacillus sp. Y412MC61, complete genomecell wall hydrolase/autolysin2e-0963.9
NC_001263:1378605:1392928139292813940431116Deinococcus radiodurans R1 chromosome 1, complete sequenceN-acetylmuramoyl-L-alanine amidase, putative2e-0963.9
NC_014328:4387303:442589644258964426588693Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0963.2
NC_006177:324363:368087368087368941855Symbiobacterium thermophilum IAM 14863, complete genomesporulation specific N-acetylmuramoyl-L-alanine amidase8e-0962
NC_019978:686362:688393688393689076684Halobacteroides halobius DSM 5150, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0861.6
NC_014829:178000:178742178742179461720Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD2e-0860.8
NC_014328:4249032:426661242666124267328717Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0860.8
NC_016077:998741:105235210523521053323972Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator2e-0860.8
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-0860.1
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-0859.7
UCMB5137:1375622:137628713762871377051765Bacillus atrophaeus UCMB-5137N-acetylmuramoyl-L-alanine amidase4e-0859.7
NC_013406:781308:801375801375802103729Paenibacillus sp. Y412MC10 chromosome, complete genomecell wall hydrolase/autolysin6e-0859.3
NC_018664:1573925:158825715882571589231975Clostridium acidurici 9a chromosome, complete genomeputative cell wall amidase LytH5e-0859.3
NC_009922:315870:3336633336633350961434Alkaliphilus oremlandii OhILAs, complete genomeSpoIID/LytB domain5e-0859.3
NC_019897:329945:329945329945330784840Thermobacillus composti KWC4 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD7e-0858.9
NC_015589:1630461:163505816350581635783726Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-0858.9
NC_007644:1293701:131535413153541316082729Moorella thermoacetica ATCC 39073, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0757.4
NC_020410:1781884:178188417818841782642759Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSporulation-specific N-acetylmuramoyl-L-alanine amidase2e-0757.4
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-0756.2
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-0756.2
NC_014652:801653:831651831651832199549Caldicellulosiruptor hydrothermalis 108 chromosome, completecell wall hydrolase/autolysin8e-0755.5