Pre_GI: BLASTP Hits

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Query: NC_013355:105500:112161 Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome

Start: 112161, End: 113102, Length: 942

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Isolation: Spoiled beer; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014834:4644047:465940746594074660378972Rhodopseudomonas palustris DX-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-54210
NC_019973:5069499:507345050734505074406957Mesorhizobium australicum WSM2073, complete genomeGDP-D-mannose dehydratase2e-53209
NC_014664:2669562:268087226808722681840969Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-44178
NC_008358:798390:807479807479808453975Hyphomonas neptunium ATCC 15444, complete genomeputative GDP-6-deoxy-D-lyxo-4-hexulose reductase3e-41169
NC_009937:53082:657716577166748978Azorhizobium caulinodans ORS 571, complete genomeGDP-6-deoxy-D-lyxo-4-hexulose reductase4e-35148
NC_015589:3711821:373975737397573740707951Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-34146
NC_014387:497883:517049517049518038990Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeNAD-dependent epimerase/dehydratase2e-32139
NC_015690:3438288:345352234535223454472951Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-31136
NC_016884:3219030:323235932323593233252894Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-31136
NC_015942:1167785:116778511677851168669885Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-30130
NC_014507:1403000:143977614397761440744969Methanoplanus petrolearius DSM 11571 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-28126
NC_008148:583030:597300597300598247948Rubrobacter xylanophilus DSM 9941, complete genomeNAD-dependent epimerase/dehydratase2e-28126
NC_015850:217495:217495217495218403909Acidithiobacillus caldus SM-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-28125
NC_015757:2343193:235652223565222357298777Sulfobacillus acidophilus TPY chromosome, complete genomeChain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase4e-27122
NC_018867:1161648:119575311957531196688936Dehalobacter sp. CF chromosome, complete genomeUDP-glucose 4-epimerase6e-27121
NC_015757:1329012:134319613431961344128933Sulfobacillus acidophilus TPY chromosome, complete genomeGDP-6-deoxy-D-lyxo-4-hexulose reductase1e-25117
NC_016884:2194419:220689722068972207829933Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-25117
NC_016935:3994500:400939640093964010250855Paenibacillus mucilaginosus 3016 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-25117
NC_015942:2316354:234363823436382344534897Acidithiobacillus ferrivorans SS3 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-24110
NC_014387:177308:189334189334190269936Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeGDP-mannose 4,6-dehydratase Gmd12e-21103
NC_012791:821371:826548826548827435888Variovorax paradoxus S110 chromosome 1, complete genomeNAD-dependent epimerase/dehydratase2e-21103
NC_008836:1072721:1087043108704310880561014Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative GDP-D-mannose dehydratase5e-21102
NC_008785:516500:5354785354785364911014Burkholderia mallei SAVP1 chromosome II, complete sequenceputative GDP-D-mannose dehydratase5e-21102
NC_006350:3329477:3343799334379933448121014Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GDP sugar epimerase/dehydratase protein5e-21102
NC_007434:3588081:3602403360240336034161014Burkholderia pseudomallei 1710b chromosome I, complete sequenceWcbK5e-21102
NC_009076:3179662:3193984319398431949971014Burkholderia pseudomallei 1106a chromosome I, complete sequenceGDP-6-deoxy-D-lyxo-4-hexulose reductase5e-21102
NC_006348:2372945:2387267238726723882801014Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceGDP-D-mannose dehydratase, putative5e-21102
NC_009080:2123987:2138309213830921393221014Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative GDP-D-mannose dehydratase5e-21102
NC_015458:3328905:333648833364883337378891Pusillimonas sp. T7-7 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-20100
NC_009074:3163362:3177684317768431786971014Burkholderia pseudomallei 668 chromosome I, complete sequenceGDP-6-deoxy-D-lyxo-4-hexulose reductase4e-2099
NC_017986:1128879:115068311506831151579897Pseudomonas putida ND6 chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-2098.6
NC_010682:1234769:123916712391671240060894Ralstonia pickettii 12J chromosome 1, complete sequenceNAD-dependent epimerase/dehydratase7e-2098.2
NC_007951:740500:740635740635741546912Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative UDP-glucose 4-epimerase1e-1997.4
NC_007005:1036243:103959310395931040489897Pseudomonas syringae pv. syringae B728a, complete genomeNAD-dependent epimerase/dehydratase2e-1996.7
NC_014972:544146:551311551311552231921Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-1894
NC_011992:571000:577556577556578422867Acidovorax ebreus TPSY, complete genomeNAD-dependent epimerase/dehydratase4e-1892.4
NC_016818:633750:641761641761642645885Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completenucleoside-diphosphate-sugar epimerase1e-1790.9
NC_015416:1039144:104900910490091049896888Methanosaeta concilii GP-6 chromosome, complete genomeNAD dependent epimerase/dehydratase1e-1790.9
NC_007508:4283750:429414042941404295075936Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeNDP-hexose oxidoreductase1e-1790.5
NC_012880:3827390:383753138375313838421891Dickeya dadantii Ech703, complete genomeNAD-dependent epimerase/dehydratase3e-1789.4
NC_004129:6240904:626562062656206266555936Pseudomonas fluorescens Pf-5, complete genomeGDP-6-deoxy-D-lyxo-4-hexulose reductase, putative5e-1789
NC_003902:714478:732274732274733212939Xanthomonas campestris pv. campestris str. ATCC 33913, completeUDP-glucose 4-epimerase9e-1787.8
NC_007086:4293405:430582443058244306762939Xanthomonas campestris pv. campestris str. 8004, complete genomeUDP-glucose 4-epimerase9e-1787.8
NC_009523:5104413:511146051114605112380921Roseiflexus sp. RS-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-1686.3
NC_013943:2857751:286240328624032863293891Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-1583.6
NC_010551:846953:860217860217861134918Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceNAD-dependent epimerase/dehydratase2e-1583.2
NC_008313:3112440:312970031297003130500801Ralstonia eutropha H16 chromosome 1, complete sequenceNucleoside-diphosphate-sugar epimerase1e-1480.5
NC_017271:770000:786563786563787501939Xanthomonas campestris pv. raphani 756C chromosome, completeUDP-glucose 4-epimerase2e-1480.5
NC_010688:4235528:424483442448344245772939Xanthomonas campestris pv. campestris, complete genomeGDP-4-dehydro-D-rhamnose reductase2e-1480.5
NC_015738:760309:7773787773787784121035Eggerthella sp. YY7918, complete genomeGDP-D-mannose dehydratase2e-1480.1
NC_013642:400651:430581430581431552972Thermotoga naphthophila RKU-10, complete genomeNAD-dependent epimerase/dehydratase2e-1480.1
NC_015381:766355:784458784458785351894Burkholderia gladioli BSR3 chromosome 1, complete sequenceGDP-6-deoxy-D-lyxo-4-hexulose reductase9e-1477.8
NC_009699:2875386:289627928962792897271993Clostridium botulinum F str. Langeland chromosome, complete genomepolysaccharide biosynthesis protein1e-1377.8
NC_007347:767455:780808780808781776969Ralstonia eutropha JMP134 chromosome 1, complete sequenceNAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase2e-1376.6
NC_013956:2749685:275940427594042760351948Pantoea ananatis LMG 20103 chromosome, complete genomeGmd3e-1376.3
NC_014006:2999500:301810330181033019002900Sphingobium japonicum UT26S chromosome 1, complete genomeputative NAD-dependent epimerase/dehydratase5e-1375.1
NC_014836:223013:233982233982234878897Desulfurispirillum indicum S5 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-1374.7
NC_015660:391627:399813399813400808996Geobacillus thermoglucosidasius C56-YS93 chromosome, completeUDP-glucose 4-epimerase9e-1374.3
NC_014733:107394:1243621243621254471086Methylovorus sp. MP688 chromosome, complete genomedtdp-glucose 4,6-dehydratase2e-1273.6
NC_006510:3133965:314990931499093150904996Geobacillus kaustophilus HTA426, complete genomedTDP-glucose 4,6-dehydratase2e-1273.6
NC_008435:3915110:391813139181313919084954Rhodopseudomonas palustris BisA53, complete genomeNAD-dependent epimerase/dehydratase2e-1273.2
NC_016940:3696570:370104237010423702037996Saprospira grandis str. Lewin chromosome, complete genomeputative GDP-D-mannose dehydratase3e-1272.8
NC_014960:1910202:191642619164261917424999Anaerolinea thermophila UNI-1, complete genomeNAD-dependent epimerase/dehydratase family protein4e-1272.4
NC_008593:980731:995017995017996012996Clostridium novyi NT, complete genomeUDP-glucose 4-epimerase3e-1272.4
NC_014032:825793:843116843116844114999Salinibacter ruber M8 chromosome, complete genomeUDP-glucose 4-epimerase5e-1272
NC_009997:3661083:368015936801593681139981Shewanella baltica OS195, complete genomeNAD-dependent epimerase/dehydratase5e-1272
NC_007626:68925:8497684976859951020Magnetospirillum magneticum AMB-1, complete genomeNucleoside-diphosphate-sugar epimerase2e-1170.1
NC_009523:5104413:511309951130995114085987Roseiflexus sp. RS-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-1169.3
NC_010516:2877407:288246328824632883455993Clostridium botulinum B1 str. Okra, complete genomeUDP-glucose 4-epimerase3e-1169.3
NC_009656:1994392:200497620049762005956981Pseudomonas aeruginosa PA7 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-1168.9
NC_015732:529201:551696551696552694999Spirochaeta caldaria DSM 7334 chromosome, complete genomedTDP-glucose 4,6-dehydratase4e-1168.9
NC_015416:1039144:104729910472991048288990Methanosaeta concilii GP-6 chromosome, complete genomeNAD dependent epimerase/dehydratase7e-1168.2
NC_007644:779376:787516787516788487972Moorella thermoacetica ATCC 39073, complete genomeNAD-dependent epimerase/dehydratase7e-1168.2
NC_008787:1345988:1346950134695013479841035Campylobacter jejuni subsp. jejuni 81-176, complete genomeGDP-mannose 4,6-dehydratase8e-1168.2
NC_009464:2523092:254704325470432547963921Uncultured methanogenic archaeon RC-I, complete genomeputative UDP-glucose 4-epimerase8e-1167.8
NC_013501:1300182:131169013116901312631942Rhodothermus marinus DSM 4252, complete genomeNAD-dependent epimerase/dehydratase9e-1167.8
NC_009707:1551412:1552744155274415537811038Campylobacter jejuni subsp. doylei 269.97 chromosome, completeGDP-mannose 4,6-dehydratase1e-1067.8
NC_014834:4644047:465842146584214659401981Rhodopseudomonas palustris DX-1 chromosome, complete genomeGDP-mannose 4,6-dehydratase3e-1066.2
NC_017281:1403000:1416444141644414174751032Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeGDP-mannose 4,6-dehydratase3e-1066.2
NC_005363:1604337:161505316150531616036984Bdellovibrio bacteriovorus HD100, complete genomeprobable UDP-glucose 4-epimerase2e-1066.2
NC_014377:480158:5179895179895190411053Thermosediminibacter oceani DSM 16646 chromosome, complete genomeGDP-mannose 4,6-dehydratase6e-1065.1
NC_011894:3268850:3298550329855032996561107Methylobacterium nodulans ORS 2060, complete genomeGDP-mannose 4,6-dehydratase8e-1064.7
NC_012491:5628000:5647320564732056483301011Brevibacillus brevis NBRC 100599, complete genomeputative dTDP-glucose 4,6-dehydratase1e-0963.9
NC_010003:1126800:113358511335851134571987Petrotoga mobilis SJ95, complete genomeUDP-glucose 4-epimerase2e-0963.5
NC_011961:891815:8956418956418966961056Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceGDP-mannose 4,6-dehydratase2e-0963.5
NC_008358:798390:806469806469807446978Hyphomonas neptunium ATCC 15444, complete genomeGDP-mannose 4,6-dehydratase2e-0963.5
NC_015437:27325:416674166742650984Selenomonas sputigena ATCC 35185 chromosome, complete genomeGDP-mannose 4,6-dehydratase3e-0963.2
NC_015958:815442:818843818843819778936Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-0962.4
NC_009925:3658182:366464236646423665574933Acaryochloris marina MBIC11017, complete genomeNDP-sugar dehydratase or epimerase/NAD binding domain 4, putative4e-0962.4
NC_010501:1518959:152350415235041524448945Pseudomonas putida W619, complete genomeNAD-dependent epimerase/dehydratase7e-0961.6
NC_005085:4335333:436215943621594363082924Chromobacterium violaceum ATCC 12472, complete genomeprobable nucleotide sugar dehydratase8e-0961.2
NC_011529:1722829:1726473172647317274741002Thermococcus onnurineus NA1, complete genomerfbB dTDP-glucose 4,6-dehydratase1e-0860.8
NC_005773:5149768:514976851497685150697930Pseudomonas syringae pv. phaseolicola 1448A, complete genomeNAD-dependent epimerase/dehydratase family protein1e-0860.8
NC_011894:4360577:436376943637694364752984Methylobacterium nodulans ORS 2060, complete genomeNAD-dependent epimerase/dehydratase1e-0860.8
NC_014820:1057826:105874610587461059645900Cenarchaeum symbiosum A, complete genomenucleoside-diphosphate-sugar epimerase1e-0860.8
NC_015573:1729057:175548817554881756447960Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeUDP-glucuronate 4-epimerase2e-0860.5
NC_016111:6222461:6222461622246162234621002Streptomyces cattleya NRRL 8057, complete genomeUDP-glucose 4-epimerase2e-0860.5
NC_002755:1684161:1703205170320517042511047Mycobacterium tuberculosis CDC1551, complete genomeGDP-D-mannose dehydratase3e-0859.7
NC_012943:2707677:2709370270937027104161047Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeGDP-D-mannose dehydratase gmdA3e-0859.7
NC_000962:1684005:1703074170307417040961023Mycobacterium tuberculosis H37Rv, complete genomeGDP-D-mannose dehydratase gmdA (GDP-mannose 4,6 dehydratase) (GMD)3e-0859.7
NC_009525:1685522:1704591170459117056131023Mycobacterium tuberculosis H37Ra, complete genomeGDP-D-mannose dehydratase3e-0859.7
NC_009565:1688642:1707711170771117087331023Mycobacterium tuberculosis F11, complete genomeGDP-D-mannose dehydratase gmdA3e-0859.7
NC_016768:2704350:2706043270604327070651023Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeGDP-D-mannose dehydratase gmdA3e-0859.7
NC_017026:1686500:1704109170410917051311023Mycobacterium tuberculosis RGTB327 chromosome, complete genomeGDP-mannose 4,6-dehydratase3e-0859.7
NC_019950:1689910:1707834170783417088561023Mycobacterium canettii CIPT 140060008 complete genomeGDP-D-mannose dehydratase GmdA (GDP-mannose 4,6 dehydratase) (GMD)3e-0859.7
NC_015848:1708176:1727249172724917282711023Mycobacterium canettii CIPT 140010059, complete genomeGDP-D-mannose dehydratase gmdA3e-0859.7
NC_009937:53082:667526675267729978Azorhizobium caulinodans ORS 571, complete genomeGDP-mannose 4,6-dehydratase3e-0859.7
NC_016604:297687:3162453162453172671023Mycobacterium rhodesiae NBB3 chromosome, complete genomeGDP-mannose 4,6-dehydratase2e-0859.7
NC_014831:866614:868093868093869061969Thermaerobacter marianensis DSM 12885 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-0859.3
NC_000868:1130944:1133627113362711346281002Pyrococcus abyssi GE5, complete genomedTDP-glucose 4,6-dehydratase4e-0858.9
NC_009464:2523092:2547984254798425489851002Uncultured methanogenic archaeon RC-I, complete genomeGDP-mannose 4,6-dehydratase5e-0858.9
NC_009921:7964128:7980567798056779816161050Frankia sp. EAN1pec, complete genomeNAD-dependent epimerase/dehydratase5e-0858.5
NC_013665:738883:754236754236755201966Methanocella paludicola SANAE, complete genomeputative nucleotide sugar epimerase/dehydratase5e-0858.5
NC_016831:854973:8688598688598698751017Salmonella enterica subsp. enterica serovar Gallinarum/pullorumCDP-tyvelose-2-epimerase1e-0757.8
NC_011294:2156425:2173674217367421746901017Salmonella enterica subsp. enterica serovar Enteritidis strCDP-tyvelose-2-epimerase1e-0757.8
NC_011274:2147427:2164676216467621656921017Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91CDP-tyvelose-2-epimerase1e-0757.8
NC_011205:2283438:2300690230069023017061017Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853CDP-paratose 2-epimerase1e-0757.8
NC_016832:861956:8758398758398768551017Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,CDP-paratose 2-epimerase1e-0757.8
NC_003198:2109775:2127027212702721280431017Salmonella enterica subsp. enterica serovar Typhi str. CT18,CDP-tyvelose-2-epimerase1e-0757.8
NC_004631:862002:8758858758858769011017Salmonella enterica subsp. enterica serovar Typhi Ty2, completeCDP-tyvelose-2-epimerase1e-0757.8
NC_014098:850000:870756870756871721966Bacillus tusciae DSM 2912 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0757.4
NC_014012:1676983:1690877169087716918811005Shewanella violacea DSS12, complete genomeGDP-mannose 4,6-dehydratase2e-0757
NC_010634:1175404:1195531119553111965591029Yersinia pseudotuberculosis PB1/+, complete genomeNAD-dependent epimerase/dehydratase2e-0757
NC_017904:3415700:3438423343842334394451023Mycobacterium sp. MOTT36Y chromosome, complete genomeGDP-mannose 4,6-dehydratase2e-0756.6
NC_007517:1676604:167985316798531680845993Geobacter metallireducens GS-15, complete genomeUDP-glucose 4-epimerase3e-0756.2
NC_012622:517436:535509535509536465957Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-0756.2
NC_006511:854785:8685748685748696051032Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCCDP-tyvelose-2-epimerase4e-0755.8
NC_016620:341699:345712345712346686975Bacteriovorax marinus SJ, complete genomeUDP-glucose 4-epimerase4e-0755.5
NC_009515:307800:309035309035309964930Methanobrevibacter smithii ATCC 35061, complete genomeUDP-glucose 4-epimerase (NAD dependent)1e-0654.7
NC_000961:372000:3776373776373786471011Pyrococcus horikoshii OT3, complete genomedTDP-glucose 4,6-dehydratase9e-0754.7
NC_009699:2875386:287538628753862876303918Clostridium botulinum F str. Langeland chromosome, complete genomeNAD-dependent epimerase/dehydratase family protein1e-0654.3
NC_016641:834500:838912838912839787876Paenibacillus terrae HPL-003 chromosome, complete genomespore coat polysaccharide biosynthesis protein spsK1e-0654.3
NC_020210:3341976:339622033962203397062843Geobacillus sp. GHH01, complete genomeputative dTDP-4-dehydrorhamnose reductase1e-0654.3
NC_014394:3036758:3056162305616230571841023Gallionella capsiferriformans ES-2 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0654.3
NC_006177:2883476:291306929130692914034966Symbiobacterium thermophilum IAM 14863, complete genomeUDP-glucose 4-epimerase1e-0654.3
NC_013406:6494079:650231465023146503192879Paenibacillus sp. Y412MC10 chromosome, complete genomedTDP-4-dehydrorhamnose reductase2e-0653.9
NC_008820:91967:1132511132511142581008Prochlorococcus marinus str. MIT 9303, complete genomeNucleoside-diphosphate-sugar epimerase2e-0653.9
NC_019978:2364000:238208323820832382919837Halobacteroides halobius DSM 5150, complete genomedTDP-4-dehydrorhamnose reductase2e-0653.5