Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:1518959 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
151895915218442886glycosyl transferase group 1QuickGO ontologyBLASTP
152184115234601620glycosyl transferase group 1QuickGO ontologyBLASTP
15235041524448945NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
152450115256101110acyltransferase 3QuickGO ontologyBLASTP
15258651526797933KpsFGutQ family proteinQuickGO ontologyBLASTP
15269181527466549dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
15274661528356891glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
15283531529258906dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
152925515303311077dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
153071115328702160hypothetical proteinBLASTP
153293815347461809Capsule polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
153474315357981056hypothetical proteinBLASTP
153585215382782427glycosyl transferase family 2QuickGO ontologyBLASTP
153827815408362559glycosyl transferase family 2QuickGO ontologyBLASTP
154098215424301449hemolysin-type calcium-binding regionQuickGO ontologyBLASTP
15424481543335888hypothetical proteinBLASTP