Pre_GI: BLASTP Hits

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Query: NC_013199:392450:401142 Lactobacillus rhamnosus Lc 705, complete genome

Start: 401142, End: 402401, Length: 1260

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:234782:2528762528762541501275Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC7e-85314
NC_013517:3948500:3949504394950439507511248Sebaldella termitidis ATCC 33386, complete genomePTS system Galactitol-specific IIC component8e-84311
NC_014377:1400544:1409809140980914111491341Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system D-arabitol-specific IIC component, Gat family (TC 4.A.5.1.2)4e-79295
NC_013316:2585666:2598301259830125995751275Clostridium difficile R20291, complete genomePTS system, galactitol-specific IIc component4e-77288
NC_013315:2505792:2517745251774525190191275Clostridium difficile CD196 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC4e-77288
NC_017179:2513804:2525757252575725270311275Clostridium difficile BI1, complete genomePTS system galactitol-specific transporter subunit IIC4e-77288
NC_014363:427393:4453194453194466801362Olsenella uli DSM 7084 chromosome, complete genomePTS system Galactitol-specific IIC component8e-77287
NC_014363:114239:1224991224991238931395Olsenella uli DSM 7084 chromosome, complete genomePTS system Galactitol-specific IIC component2e-75283
NC_014650:2417509:2427176242717624284381263Geobacillus sp. Y4.1MC1 chromosome, complete genomePTS system, galactitol-specific IIC subunit5e-75281
NC_002570:207555:2075552075552088141260Bacillus halodurans C-125, complete genomePTS system, galactitol-specific enzyme II, C component1e-73277
NC_008555:2628858:2643764264376426450351272Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, galactitol-specific, IIC component8e-71268
NC_003210:2721559:2738719273871927399901272Listeria monocytogenes EGD-e, complete genomehypothetical protein8e-71268
NC_003212:2814737:2829667282966728309381272Listeria innocua Clip11262, complete genomehypothetical protein3e-70266
NC_016860:3995445:4005126400512640064841359Salmonella enterica subsp. enterica serovar Typhimurium strgalactitol-specific PTS system IIC protein1e-68261
NC_016857:3993864:4003544400354440049021359Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative PTS system galactitol-specific enzyme IIC component1e-68261
NC_016856:3985597:3995922399592239972801359Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative PTS system galactitol-specific enzyme IIC component1e-68261
NC_016810:3993863:4003543400354340049011359Salmonella enterica subsp. enterica serovar Typhimurium strPTS system galactitol-specific transporter subunit IIC1e-68261
NC_011080:3941909:3952814395281439541721359Salmonella enterica subsp. enterica serovar Newport str. SL254,PTS system, galactitol-specific IIC component1e-68261
NC_003197:3971905:3982230398223039835881359Salmonella typhimurium LT2, complete genomeputative PTS system galactitol-specific enzyme IIC component1e-68261
NC_011083:3985618:3996439399643939977971359Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,PTS system, galactitol-specific IIC component1e-68261
NC_016863:3933848:3943529394352939448871359Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative PTS system galactitol-specific enzyme IIC component1e-68261
NC_017046:3991551:4002371400237140037291359Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system galactitol-specific transporter subunit IIC1e-68261
NC_011094:3853036:3863941386394138652991359Salmonella enterica subsp. enterica serovar Schwarzengrund strPTS system galactitol-specific transporter subunit IIC6e-69261
NC_004631:3841975:3850698385069838520561359Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative IIC component of PTS system7e-69261
NC_003198:3855157:3865208386520838665661359Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system IIC component7e-69261
NC_011147:3755725:3766041376604137673991359Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system transporter subunit IIC7e-69261
NC_010102:3919999:3930324393032439316821359Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-69261
NC_006511:3759550:3770362377036237717201359Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system IIC component7e-69261
NC_011149:3895921:3906742390674239081001359Salmonella enterica subsp. enterica serovar Agona str. SL483,PTS system, galactitol-specific IIC component7e-69261
NC_006905:3913988:3921897392189739232551359Salmonella enterica subsp. enterica serovar Choleraesuis strputative PTS system galactitol-specific enzyme IIC component2e-68259
NC_012125:3905782:3916687391668739180451359Salmonella enterica subsp. enterica serovar Paratyphi C strainPTS system IIC component2e-68259
NC_015389:481282:4812824812824826941413Coriobacterium glomerans PW2 chromosome, complete genomePTS system Galactitol-specific IIC component3e-67256
NC_016818:3736213:3751783375178337531501368Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system galactitol-specific transporter subunit IIC6e-67254
NC_017047:3793000:3808980380898038103471368Rahnella aquatilis HX2 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC7e-67254
NC_015061:3725921:3744334374433437457011368Rahnella sp. Y9602 chromosome, complete genomePTS system, galactitol-specific IIC subunit7e-67254
NC_004431:2444972:2462965246296524643201356Escherichia coli CFT073, complete genomePTS system, galactitol-specific IIC component2e-66253
NC_013008:2824511:2842239284223928435941356Escherichia coli O157:H7 str. TW14359 chromosome, complete genomegalactitol-specific enzyme IIC component of PTS2e-66253
NC_012967:2105251:2126283212628321276381356Escherichia coli B str. REL606 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC2e-66253
NC_011353:2825500:2843259284325928446141356Escherichia coli O157:H7 str. EC4115 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC2e-66253
NC_008253:2198583:2213500221350022148551356Escherichia coli 536, complete genomePTS system, galactitol-specific IIC component4e-66252
NC_014363:8228:1784317843191111269Olsenella uli DSM 7084 chromosome, complete genomePTS system Galactitol-specific IIC component3e-66252
NC_012947:3883484:3903727390372739050401314Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completePTS system, galactitol-specific IIC subunit2e-62240
NC_010468:1816359:1821691182169118230611371Escherichia coli ATCC 8739, complete genomePTS system Galactitol-specific IIC component1e-52207
NC_014624:1675500:1760333176033317616491317Eubacterium limosum KIST612 chromosome, complete genomePTS system protein1e-52207
NC_011083:3171171:3183090318309031844601371Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,galacitol pts, eiic6e-52205
NC_014618:3700640:3706170370617037074231254Enterobacter cloacae SCF1 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC4e-51202
NC_016627:1807866:1823602182360218249361335Clostridium clariflavum DSM 19732 chromosome, complete genomephosphotransferase system, galactitol-specific IIC component4e-51202
NC_006085:15246:2373423734249901257Propionibacterium acnes KPA171202, complete genomePTS system, galactitol-specific IIC component7e-51201
NC_016511:15100:2358823588248441257Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system galactitol-specific transporter subunit IIC7e-51201
NC_016512:15102:2359023590248461257Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system galactitol-specific transporter subunit IIC7e-51201
NC_016516:15102:2359023590248461257Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system galactitol-specific transporter subunit IIC7e-51201
NC_011083:3171171:3179018317901831802711254Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,PTS system, galactitol-specific IIC component8e-50198
NC_010468:1816359:1825809182580918270621254Escherichia coli ATCC 8739, complete genomePTS system Galactitol-specific IIC component1e-48194
NC_013517:1849912:1860438186043818617991362Sebaldella termitidis ATCC 33386, complete genomePTS system Galactitol-specific IIC component2e-46186
NC_015732:3145634:3163152316315231644981347Spirochaeta caldaria DSM 7334 chromosome, complete genomePTS system Galactitol-specific IIC component3e-46186
NC_021182:3771523:3784468378446837858231356Clostridium pasteurianum BC1, complete genomephosphotransferase system, galactitol-specific IIC component1e-40167
NC_015389:616430:6255676255676269821416Coriobacterium glomerans PW2 chromosome, complete genomePTS system Galactitol-specific IIC component4e-39162
NC_014039:15236:242692426924979711Propionibacterium acnes SK137 chromosome, complete genomehypothetical protein1e-34147
NC_014363:427393:4363304363304377181389Olsenella uli DSM 7084 chromosome, complete genomePTS system Galactitol-specific IIC component4e-34146
NC_009617:648000:6524806524806538981419Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC1e-28127
NC_016023:1874827:1898517189851718999741458Bacillus coagulans 36D1 chromosome, complete genomePTS system galactitol-specific transporter subunit IIC6e-27122
NC_014039:15236:237242372424272549Propionibacterium acnes SK137 chromosome, complete genomehypothetical protein6e-0755.8