Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:2198583 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
219858321999981416hypothetical transport protein YegBQuickGO ontologyBLASTP
219999522013981404sensor protein BaeSQuickGO ontologyBLASTP
22013952202117723transcriptional regulatory protein BaeRQuickGO ontologyBLASTP
22022972202629333hypothetical protein YegPQuickGO ontologyBLASTP
22027542203368615hypothetical proteinBLASTP
220342022055282109hypothetical proteinBLASTP
22055392206255717hypothetical proteinBLASTP
220625522074691215putative cytoplasmic proteinQuickGO ontologyBLASTP
220795722093181362putative protease YegQQuickGO ontologyBLASTP
22098182210135318hypothetical protein YegRQuickGO ontologyBLASTP
22105512211450900hypothetical protein YegS putative diacylglycerol kinase catalytic domainQuickGO ontologyBLASTP
22115322212305774galactitol utilization operon repressorQuickGO ontologyBLASTP
22124112213358948galactitol-1-phosphate 5-dehydrogenaseQuickGO ontologyBLASTP
221350022148551356PTS system galactitol-specific IIC componentQuickGO ontologyBLASTP
22148592215143285PTS system galactitol-specific IIB componentQuickGO ontologyBLASTP
22151742215626453PTS system galactitol-specific IIA componentQuickGO ontologyBLASTP
221563622168981263putative tagatose 6-phosphate kinase gatZQuickGO ontologyBLASTP
22169272217781855tagatose-bisphosphate aldolase GatYQuickGO ontologyBLASTP