Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2825500 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28255312826385855phage capsid scaffolding protein GpOQuickGO ontologyBLASTP
282655928283311773phage large terminase subunit GpPQuickGO ontologyBLASTP
282833128293651035phage portal protein pbsx familyQuickGO ontologyBLASTP
28294042829565162hypothetical proteinBLASTP
282968328316501968hypothetical proteinBLASTP
28316502832102453hypothetical proteinBLASTP
283214928333721224hypothetical proteinBLASTP
283346228357442283bacteriophage replication gene A proteinQuickGO ontologyBLASTP
28357342836009276hypothetical proteinBLASTP
28360062836230225C4-type zinc finger protein DksATraR familyQuickGO ontologyBLASTP
28362332836532300hypothetical proteinBLASTP
28365322836756225hypothetical proteinBLASTP
28368202837320501replication gene B proteinQuickGO ontologyBLASTP
28373172837487171hypothetical proteinBLASTP
28374982837683186Cox proteinQuickGO ontologyBLASTP
283831028393231014integraseQuickGO ontologyBLASTP
28395882839920333hypothetical proteinBLASTP
28403112841210900lipid kinaseQuickGO ontologyBLASTP
28412922842071780galactitol utilization operon repressorQuickGO ontologyBLASTP
284217128432111041galactitol-1-phosphate dehydrogenaseQuickGO ontologyBLASTP
284325928446141356PTS system galactitol-specific transporter subunit IICQuickGO ontologyBLASTP