Pre_GI: BLASTP Hits

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Query: NC_013198:2088780:2101894 Lactobacillus rhamnosus GG, complete genome

Start: 2101894, End: 2103315, Length: 1422

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014334:1954333:1964711196471119661411431Lactobacillus casei str. Zhang chromosome, complete genomepolysaccharide Transporter, PST family2e-155548
NC_010999:2155714:2163855216385521652911437Lactobacillus casei, complete genomeRepeat unit transporter2e-146519
NC_014554:1019730:1036622103662210380371416Lactobacillus plantarum subsp. plantarum ST-III chromosome,polysaccharide biosynthesis protein9e-119427
NC_008532:973510:9803289803289817431416Streptococcus thermophilus LMD-9, complete genomePolysaccharide Transporter, PST family6e-118424
NC_014727:1832144:1844780184478018462101431Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,mop superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter2e-115416
NC_004567:1066710:1076392107639210778191428Lactobacillus plantarum WCFS1, complete genomerepeat unit transporter3e-115415
NC_008054:1649160:1670765167076516721951431Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIK, Putative polysaccharide repeat unit transport protein9e-113407
NC_010610:1580483:1604607160460716060371431Lactobacillus fermentum IFO 3956, complete genomehypothetical protein7e-108391
NC_020207:843822:8561968561968576261431Enterococcus faecium NRRL B-2354, complete genomeMembrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acid5e-86318
NC_016077:998741:1049625104962510510701446Acidaminococcus intestini RyC-MR95 chromosome, complete genomepolysaccharide transporter9e-78291
NC_015500:311845:3252763252763267391464Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein6e-74278
NC_014727:1877764:1889289188928918907261438Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,4e-72272
NC_012914:469117:4852194852194866761458Paenibacillus sp. JDR-2, complete genomepolysaccharide biosynthesis protein6e-71268
NC_012466:318675:3227633227633242261464Streptococcus pneumoniae JJA, complete genomeflippase Wzx6e-70265
NC_015975:99500:1164301164301179111482Lactobacillus ruminis ATCC 27782 chromosome, complete genomeExoploysaccharide biosynthesis flippase enzyme9e-70264
NC_009253:3272000:3301258330125833026731416Desulfotomaculum reducens MI-1 chromosome, complete genomepolysaccharide biosynthesis protein5e-69262
NC_013530:3204825:3231873323187332333301458Xylanimonas cellulosilytica DSM 15894, complete genomepolysaccharide biosynthesis protein2e-68260
NC_008054:1617544:1626309162630916277421434Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIL, Putative polysaccharide repeat unit transport protein1e-65250
NC_008529:1634403:1641495164149516429281434Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePolysaccharide Transporter, PST family3e-65249
NC_015737:2691246:2755755275575527572211467Clostridium sp. SY8519, complete genomehypothetical protein2e-64246
NC_014387:993013:1005656100565610070861431Butyrivibrio proteoclasticus B316 chromosome 1, complete genomepolysaccharide biosynthesis protein3e-61236
NC_009615:487173:5063875063875078711485Parabacteroides distasonis ATCC 8503 chromosome, complete genomeCPS repeat-containing transporter2e-59230
NC_014033:1808782:1833611183361118350591449Prevotella ruminicola 23 chromosome, complete genomePTS system polysaccharide transporter6e-57221
NC_014624:1675500:1695467169546716969421476Eubacterium limosum KIST612 chromosome, complete genomepolysaccharide biosynthesis protein2e-54213
NC_011835:733320:7588137588137602491437Bifidobacterium animalis subsp. lactis AD011 chromosome, completeflippase Wzx5e-53209
NC_017214:299637:3251253251253265611437Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeOligosaccharide translocase (flippase)5e-53209
NC_017215:1605917:1632519163251916339551437Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Oligosaccharide translocase (flippase)5e-53209
NC_017216:1603000:1627530162753016289661437Bifidobacterium animalis subsp. lactis BLC1, complete genomeLPS biosynthesis related flippase Wzx5e-53209
NC_015500:1923514:1942703194270319441601458Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein6e-49195
NC_017217:1607679:1633172163317216345061335Bifidobacterium animalis subsp. lactis V9 chromosome, completeflippase Wzx2e-45184
NC_012814:1599241:1627885162788516292191335Bifidobacterium animalis subsp. lactis Bl-04, complete genomeflippase Wzx2e-45184
NC_012815:1603916:1627603162760316289371335Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeflippase Wzx2e-45184
NC_012778:137064:1543871543871558441458Eubacterium eligens ATCC 27750, complete genomepolysaccharide transporter, PST family9e-45181
NC_010278:1625695:1639637163963716410881452Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,flippase Wzx5e-44179
NC_008054:1617544:163363016336301634133504Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete2e-41170
NC_008054:1617544:163278416327841633431648Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete6e-40165
NC_012815:1603916:1617794161779416192451452Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeflippase Wzx7e-39162
NC_012814:1599241:1618076161807616195271452Bifidobacterium animalis subsp. lactis Bl-04, complete genomeflippase Wzx7e-39162
NC_017216:1603000:1617721161772116191721452Bifidobacterium animalis subsp. lactis BLC1, complete genomePolysaccharide biosynthesis protein flippase Wzx7e-39162
NC_017217:1607679:1623363162336316248141452Bifidobacterium animalis subsp. lactis V9 chromosome, completeflippase Wzx7e-39162
NC_017214:299637:3153163153163167791464Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeCapsular polysaccharide repeat unit transport protein6e-39162
NC_017215:1605917:1622710162271016241731464Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Oligosaccharide translocase (flippase)6e-39162
NC_011835:733320:7490047490047504431440Bifidobacterium animalis subsp. lactis AD011 chromosome, completeflippase Wzx8e-39161
NC_017218:534699:5473935473935488621470Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomepolysaccharide biosynthesis protein1e-37157
NC_009615:322107:3358983358983373011404Parabacteroides distasonis ATCC 8503 chromosome, complete genomeLPS biosynthesis flippase4e-34146
NC_015185:1352171:1353568135356813548481281Desulfurobacterium thermolithotrophum DSM 11699 chromosome,polysaccharide biosynthesis protein4e-34146
NC_013410:1203937:1215569121556912170261458Fibrobacter succinogenes subsp. succinogenes S85 chromosome,polysaccharide biosynthesis protein4e-33142
NC_006510:3321426:3341644334164433429331290Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter1e-30134
NC_011916:467106:4804394804394817101272Caulobacter crescentus NA1000 chromosome, complete genomeoligosaccharide translocase/flippase4e-30133
NC_017272:607900:6201606201606214491290Thermus thermophilus SG0.5JP17-16 chromosome, complete genomepolysaccharide biosynthesis protein1e-28127
NC_006510:3321426:3363539336353933647981260Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter6e-27122
NC_013946:2050871:2064784206478420660581275Meiothermus ruber DSM 1279 chromosome, complete genomepolysaccharide biosynthesis protein7e-27122
NC_006461:605249:6171536171536184181266Thermus thermophilus HB8, complete genomeputative O-antigen transporter1e-26121
NC_011001:1462532:1480615148061514818681254Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative exopolysaccharide transporter2e-26120
NC_013730:7743954:7755334775533477566291296Spirosoma linguale DSM 74, complete genomepolysaccharide biosynthesis protein6e-26119
NC_010681:934374:9486099486099498681260Burkholderia phytofirmans PsJN chromosome 1, complete sequencepolysaccharide biosynthesis protein2e-25117
NC_014119:977136:9835949835949848591266Burkholderia sp. CCGE1002 chromosome chromosome 3, completepolysaccharide biosynthesis protein3e-24113
NC_015385:1406419:1430883143088314323641482Treponema succinifaciens DSM 2489 chromosome, complete genomepolysaccharide biosynthesis protein3e-24113
NC_009337:1200722:1214355121435512155691215Chlorobium phaeovibrioides DSM 265 chromosome, complete genomepolysaccharide biosynthesis protein3e-24113
NC_011415:2346474:2365729236572923669791251Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-24112
NC_008529:1663000:1670576167057616719071332Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePolysaccharide Transporter, PST family9e-24111
NC_015144:997587:1006361100636110075991239Weeksella virosa DSM 16922 chromosome, complete genomepolysaccharide biosynthesis protein9e-24111
NC_011026:2450325:2463753246375324650031251Chloroherpeton thalassium ATCC 35110, complete genomepolysaccharide biosynthesis protein3e-23110
NC_014408:682689:7036937036937049521260Methanothermobacter marburgensis str. Marburg chromosome, completepolysaccharide biosynthesis protein2e-22107
NC_020054:1002906:1009197100919710104951299Fibrella aestuarina BUZ 2 drat genomeputative O-antigen transporter3e-22107
NC_014212:2776457:2790238279023827914761239Meiothermus silvanus DSM 9946 chromosome, complete genomepolysaccharide biosynthesis protein5e-22106
NC_014974:246404:2509712509712522931323Thermus scotoductus SA-01 chromosome, complete genomeO-antigen transporter1e-21104
NC_015224:1391088:1399234139923414004901257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,translocase2e-21104
NC_014935:1389000:1409861140986114111321272Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepolysaccharide biosynthesis protein1e-1998.2
NC_012483:30784:6336163361647131353Acidobacterium capsulatum ATCC 51196, complete genomeputative O-antigen transporter2e-1997.8
NC_012759:1983975:1998844199884420000911248Escherichia coli BW2952 chromosome, complete genomeputative polisoprenol-linked O-antigen transporter3e-1997.1
NC_010473:2183567:2197369219736921986161248Escherichia coli str. K-12 substr. DH10B, complete genomepredicted polisoprenol-linked O-antigen transporter3e-1997.1
NC_000913:2092559:2106361210636121076081248Escherichia coli K12, complete genomepredicted polisoprenol-linked O-antigen transporter3e-1997.1
AC_000091:2096672:2110474211047421117211248Escherichia coli W3110 DNA, complete genomepredicted polisoprenol-linked O-antigen transporter3e-1997.1
NC_010831:2078329:2094543209454320958171275Chlorobium phaeobacteroides BS1, complete genomepolysaccharide biosynthesis protein6e-1995.9
NC_014758:1207894:1237144123714412384271284Calditerrivibrio nitroreducens DSM 19672 chromosome, completepolysaccharide biosynthesis protein2e-1894
NC_007511:2072838:2072838207283820740941257Burkholderia sp. 383 chromosome 2, complete sequencePolysaccharide biosynthesis protein8e-1892
NC_007606:1999870:2010259201025920114491191Shigella dysenteriae Sd197, complete genomeputative O-antigen transporter2e-1687
NC_013894:117644:1321121321121333981287Thermocrinis albus DSM 14484 chromosome, complete genomepolysaccharide biosynthesis protein3e-1583.2
NC_009655:866281:8748968748968761521257Actinobacillus succinogenes 130Z chromosome, complete genomepolysaccharide biosynthesis protein6e-1582.8
NC_013508:1289159:1296989129698912981041116Edwardsiella tarda EIB202, complete genomeO-unit translocase (flippase)1e-1481.3
NC_015160:136055:1439691439691452281260Odoribacter splanchnicus DSM 20712 chromosome, complete genomepolysaccharide biosynthesis protein1e-1378.6
NC_015966:2256943:2273729227372922749701242Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomepolysaccharide biosynthesis protein1e-1378.6
NC_006300:600516:6091126091126104041293Mannheimia succiniciproducens MBEL55E, complete genomeRfbX protein1e-1378.2
NC_012779:1286500:1294276129427612955231248Edwardsiella ictaluri 93-146, complete genomeO antigen transporter2e-1377.8
NC_009615:1627961:1641634164163416428841251Parabacteroides distasonis ATCC 8503 chromosome, complete genomeO-antigen transporter4e-1376.6
NC_010658:1090104:1103246110324611044631218Shigella boydii CDC 3083-94, complete genomeWzx5e-1376.3
NC_008570:3220539:3241655324165532428691215Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomepolysaccharide biosynthesis protein5e-1375.9
NC_010939:1633000:1642833164283316440951263Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative O-antigen transporter3e-1273.9
NC_003901:2479613:2511149251114925126091461Methanosarcina mazei Go1, complete genomeheteropolysaccharide repeat-containing protein3e-1170.1
NC_011978:15059:311163111631667552Thermotoga neapolitana DSM 4359, complete genomehypothetical protein5e-1169.3
NC_008563:2182270:2195479219547921967051227Escherichia coli APEC O1, complete genomeputative O-antigen transporter1e-1068.2
NC_005823:2566588:2579934257993425812771344Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130polysaccharide biosynthesis export protein1e-1068.2
NC_010483:273080:291504291504292019516Thermotoga sp. RQ2, complete genome1e-1068.2
NC_010322:1520973:1530434153043415316841251Pseudomonas putida GB-1 chromosome, complete genomepolysaccharide biosynthesis protein5e-1066.2
NC_020260:1184174:1194615119461511958711257Cronobacter sakazakii Sp291, complete genomeO-antigen, teichoic acid lipoteichoic acids export membrane protein5e-1066.2
NC_006582:3827844:3842212384221238434891278Bacillus clausii KSM-K16, complete genomeO-antigen transporter2e-0964.3
NC_010571:4483500:4498225449822544995081284Opitutus terrae PB90-1, complete genomepolysaccharide biosynthesis protein2e-0963.9
NC_014836:2723060:2740201274020127415531353Desulfurispirillum indicum S5 chromosome, complete genomepolysaccharide biosynthesis protein3e-0963.5
NC_000917:532500:5359265359265373741449Archaeoglobus fulgidus DSM 4304, complete genomepolysaccharide biosynthesis protein, putative1e-0861.2
NC_008942:1446682:1451502145150214529741473Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0860.8
NC_016112:57641:6697366973683101338Methylomicrobium alcaliphilum chromosome, complete genomepolysaccharide biosynthesis protein3e-0860.5
NC_009511:2921448:2932278293227829335581281Sphingomonas wittichii RW1 chromosome, complete genomepolysaccharide biosynthesis protein4e-0859.7
NC_013158:1027015:1047312104731210487811470Halorhabdus utahensis DSM 12940, complete genomepolysaccharide biosynthesis protein5e-0859.7
NC_004757:2451919:246404024640402464840801Nitrosomonas europaea ATCC 19718, complete genome6e-0859.3
NC_014002:80967:8842188421897401320Methanohalophilus mahii DSM 5219 chromosome, complete genomepolysaccharide biosynthesis protein9e-0858.5
NC_006624:1494424:1502593150259315038401248Thermococcus kodakarensis KOD1, complete genomecapsular polysaccharide biosynthesis protein1e-0758.5
NC_010475:2537500:2546615254661525479521338Synechococcus sp. PCC 7002, complete genomepolysaccharide biosynthesis export protein1e-0758.2
NC_008781:3365468:3386777338677733881171341Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide biosynthesis protein2e-0757.4
NC_007514:904565:9374489374489387281281Chlorobium chlorochromatii CaD3, complete genomeprobable polysaccharide biosynthesis protein3e-0757.4
NC_007613:864084:8770268770268782551230Shigella boydii Sb227, complete genomeO-antigen flippase4e-0756.6
NC_018876:516220:5310145310145324651452Methanolobus psychrophilus R15 chromosome, complete genomepolysaccharide biosynthesis protein4e-0756.6
NC_014012:1676983:1687576168757616888201245Shewanella violacea DSS12, complete genomepolysaccharide biosynthesis family protein4e-0756.6
NC_014315:3278386:3279917327991732814551539Nitrosococcus watsoni C-113 chromosome, complete genomeintegral membrane protein MviN7e-0755.8
NC_013716:2255102:2267984226798422691951212Citrobacter rodentium ICC168, complete genomeputative O-antigen transporter7e-0755.8
NC_019974:2889375:2898345289834528998111467Natronococcus occultus SP4, complete genomemembrane protein involved in the export of O-antigen and teichoic acid1e-0655.1
NC_014724:1731238:1731238173123817328841647Lactobacillus amylovorus GRL 1112 chromosome, complete genomeputative polysaccharide transporter1e-0655.1
NC_011529:1722829:1730948173094817323721425Thermococcus onnurineus NA1, complete genomehypothetical lipopolysaccharide O-side chain biosynthesis protein1e-0654.7
NC_013204:2826500:2838118283811828394131296Eggerthella lenta DSM 2243, complete genomepolysaccharide biosynthesis protein1e-0654.7
NC_015214:1700000:1700007170000717015871581Lactobacillus acidophilus 30SC chromosome, complete genomepolysaccharide transporter1e-0654.7
NC_007484:3429140:3433639343363934351771539Nitrosococcus oceani ATCC 19707, complete genomeVirulence factor MVIN-like2e-0654.3
CP002516:1846492:1855083185508318563211239Escherichia coli KO11, complete genomepolysaccharide biosynthesis protein2e-0654.3
CP002185:2233732:2249534224953422507721239Escherichia coli W, complete genomeputative O antigen flippase2e-0654.3
NC_016902:1846492:1855083185508318563211239Escherichia coli KO11FL chromosome, complete genomepolysaccharide biosynthesis protein2e-0654.3
NC_013967:1878045:1903778190377819051961419Haloferax volcanii DS2 chromosome, complete genomeprobable transport protein, putative2e-0654.3
NC_009438:2939478:2952196295219629534251230Shewanella putrefaciens CN-32 chromosome, complete genomepolysaccharide biosynthesis protein4e-0653.1
NC_008530:469802:4892494892494909071659Lactobacillus gasseri ATCC 33323, complete genomePolysaccharide transport membrane protein6e-0652.8
NC_007796:3422000:3437099343709934385261428Methanospirillum hungatei JF-1, complete genomepolysaccharide biosynthesis protein8e-0652.4
NC_008253:2134110:2149283214928321505211239Escherichia coli 536, complete genomeputative O antigen flippase9e-0652
NC_019974:2889375:2904287290428729057501464Natronococcus occultus SP4, complete genomemembrane protein involved in the export of O-antigen and teichoic acid9e-0652
NC_004431:2383901:2399075239907524003311257Escherichia coli CFT073, complete genomehypothetical protein1e-0552