Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:30784 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30784323431560glycosyl hydrolase family 32QuickGO ontologyBLASTP
32419337741356MFS transporter SP familyQuickGO ontologyBLASTP
33796354751680BNRAsp-box repeat proteinQuickGO ontology
35468367031236GDSL-like lipaseacylhydrolase family proteinQuickGO ontologyBLASTP
36784379141131SIS domain proteinQuickGO ontologyBLASTP
38320403802061glycosyl hydrolase family 20QuickGO ontologyBLASTP
40674427612088chitinaseQuickGO ontologyBLASTP
42973441991227Tat pathway signal sequence domain proteinQuickGO ontologyBLASTP
44249456131365transporter gluconateH symporter GntP familyQuickGO ontologyBLASTP
4576446003240hypothetical protein
46098475611464N-acyl-D-aspartate deacylaseQuickGO ontologyBLASTP
47654489371284hypothetical proteinBLASTP
49032512482217glycosyl hydrolase family 20 catalytic domain proteinQuickGO ontologyBLASTP
51542528281287chitinase AQuickGO ontologyBLASTP
52968555742607chitinase AQuickGO ontologyBLASTP
5612656911786transcriptional regulator DeoR familyQuickGO ontologyBLASTP
57386608623477tonB-dependent receptor plug domain proteinQuickGO ontologyBLASTP
60921621021182TPR domain proteinQuickGO ontologyBLASTP
623876248094tRNA-SerQuickGO ontology
63361647131353putative O-antigen transporterQuickGO ontologyBLASTP
65011662011191glycosyl transferase group 1 familyQuickGO ontologyBLASTP
66450674901041glycosyl transferase group 2 familyQuickGO ontologyBLASTP
67898691481251O-antigen polymeraseQuickGO ontologyBLASTP
6926970258990heptosyltransferase family proteinQuickGO ontologyBLASTP
715937169199hypothetical protein
71812730321221alpha-galactosidaseQuickGO ontologyBLASTP
731317570725772-oxoglutarate dehydrogenase E1 componentQuickGO ontologyBLASTP
7613376438306plasmid stabilization system protein RelEParE familyQuickGO ontologyBLASTP
7642976779351putative addiction module component TIGR02574 familyQuickGO ontology
7772178065345hypothetical protein
7808978376288hypothetical protein
7867978879201cold shock proteinQuickGO ontologyBLASTP
78944802181275insulinase family proteinQuickGO ontologyBLASTP
80334815241191radical SAM enzyme Cfr familyQuickGO ontologyBLASTP
8178581958174hypothetical protein
82151832391089RecFRecNSMC N-terminal domain proteinQuickGO ontologyBLASTP
83280843441065hypothetical proteinBLASTP
8440484961558TPR domain proteinQuickGO ontology