Pre_GI Gene

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Host: NC_015214 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015214:1700000 Lactobacillus acidophilus 30SC chromosome, complete genome

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
170000717015871581polysaccharide transporterQuickGO ontologyBLASTP
170174717041612415leucyl-tRNA synthetaseQuickGO ontologyBLASTP
17044541705116663membrane-associated phospholipid phosphataseQuickGO ontologyBLASTP
170515717066171461Permease of the major facilitator superfamily proteinQuickGO ontologyBLASTP
170664017078391200S-adenosylmethionine synthetaseQuickGO ontologyBLASTP
1707998170807073tRNA-ValQuickGO ontologyBLASTP
1708076170814772tRNA-GluQuickGO ontologyBLASTP
17082891709176888ABC-type metal ion transport system substrate binding-proteinsurface adhesinQuickGO ontologyBLASTP
1709284170937491tRNA-SerQuickGO ontologyBLASTP
1709385170945773tRNA-AsnQuickGO ontology
170947117095871175S ribosomal RNAQuickGO ontologyBLASTP
17096571712553289723S ribosomal RNAQuickGO ontologyBLASTP
17125651712750186hypothetical proteinBLASTP
17127591714333157516S ribosomal RNAQuickGO ontologyBLASTP
171498117162881308seryl-tRNA synthetaseQuickGO ontologyBLASTP
17165131717064552ribosomal-protein-alanine N-acetyltransferaseQuickGO ontologyBLASTP
17170641717672609hypothetical proteinBLASTP
17178421718636795esteraseQuickGO ontologyBLASTP
17186391719496858regulatorQuickGO ontologyBLASTP
17195331720036504nucleoside deoxyribosyltransferaseQuickGO ontologyBLASTP
172019717215791383NAD-dependent aldehyde dehydrogenaseQuickGO ontologyBLASTP