Pre_GI Gene

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Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:2537500 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25378552538574720GTP cyclohydrolase IQuickGO ontologyBLASTP
253869425397941101oxidoreductase FADFMN-binding proteinQuickGO ontologyBLASTP
253986725415341668probable ATPaseQuickGO ontologyBLASTP
254155625434421887hypothetical proteinBLASTP
25439342544341408hypothetical protein
25446172545468852glycosyltransferaseQuickGO ontologyBLASTP
254551825466001083glycosyl transferaseQuickGO ontologyBLASTP
254661525479521338polysaccharide biosynthesis export proteinQuickGO ontologyBLASTP
254802125506302610Fe-S oxidoreductases family 2 protein adical SAM domain proteinQuickGO ontologyBLASTP
25507022551178477anti-sigma factor antagonistQuickGO ontologyBLASTP
25514962551699204hypothetical protein
25517082552370663endonuclease IIIQuickGO ontologyBLASTP
255244025545812142glycyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
25548122555123312chaperonin 10 kDa proteinQuickGO ontologyBLASTP
255520725568321626chaperonin 60 kDa proteinQuickGO ontologyBLASTP