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Query: NC_010475:2537500 Synechococcus sp. PCC 7002, complete genome

Start: 2537500, End: 2556832, Length: 19333

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007516:1974500*1974500199561621117Synechococcus sp. CC9605, complete genome9e-46192BLASTN svgBLASTP svg
NC_007513:513806*51380653756623761Synechococcus sp. CC9902, complete genome4e-23117BLASTN svgBLASTP svg
NC_007412:14775714775717525527499Anabaena variabilis ATCC 29413 plasmid C, complete sequence1e-20109BLASTN svgBLASTP svg
NC_010628:36751283675128369309917972Nostoc punctiforme PCC 73102, complete genome3e-18101BLASTN svgBLASTP svg
NC_010546:4590994*4590994461086219869Cyanothece sp. ATCC 51142 chromosome circular, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_012673:20642982064298209009925802Exiguobacterium sp. AT1b, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_014248:685656*68565670976324108Nostoc azollae 0708 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_000911:2511514*2511514253409922586Synechocystis sp. PCC 6803, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002179:66718266718268743020249Chlamydophila pneumoniae AR39, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002491:15632515632517436718043Chlamydophila pneumoniae J138, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006085:481231*48123150479923569Propionibacterium acnes KPA171202, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014039:499233*49923352279623564Propionibacterium acnes SK137 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020272:3325000*3325000334759922600Bacillus amyloliquefaciens IT-45, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008312:409830*40983043211522286Trichodesmium erythraeum IMS101, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013510:888542*88854291609927558Thermomonospora curvata DSM 43183, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009009:219087*21908723832519239Streptococcus sanguinis SK36, complete genome6e-0763.9BLASTN svgBLASTP svg