Pre_GI: BLASTP Hits

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Query: NC_012811:139498:154968 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 154968, End: 156302, Length: 1335

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:1067543:1082976108297610843101335Methylobacterium chloromethanicum CM4, complete genomehistidine kinase0707
NC_018012:4184500:4201879420187942034021524Thiocystis violascens DSM 198 chromosome, complete genomesignal transduction histidine kinase2e-41170
NC_010581:2943913:2956510295651029579281419Beijerinckia indica subsp. indica ATCC 9039, complete genomeintegral membrane sensor signal transduction histidine kinase1e-35151
NC_007492:6372900:6393049639304963943561308Pseudomonas fluorescens PfO-1, complete genomePeriplasmic Sensor Signal Transduction Histidine Kinase3e-34146
NC_004129:5723787:5756132575613257574721341Pseudomonas fluorescens Pf-5, complete genomesensor histidine kinase1e-33144
NC_012988:4353000:4354748435474843560491302Methylobacterium extorquens DM4, complete genomeintegral membrane sensor signal transduction histidine kinase3e-33143
NC_008343:823093:8370268370268384621437Granulibacter bethesdensis CGDNIH1, complete genometwo component system histidine kinase3e-31136
NC_009512:5920960:5935032593503259363091278Pseudomonas putida F1, complete genomehistidine kinase1e-30134
NC_008687:388262:398991398991399803813Paracoccus denitrificans PD1222 chromosome 2, complete sequencehistidine kinase1e-28127
NC_007347:3612918:3633729363372936348051077Ralstonia eutropha JMP134 chromosome 1, complete sequenceATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal1e-27124
NC_009255:213245:2288582288582301951338Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegral membrane sensor signal transduction histidine kinase7e-26118
NC_009049:1934398:1934398193439819357171320Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceintegral membrane sensor signal transduction histidine kinase1e-25117
NC_011985:194973:1986011986011999561356Agrobacterium radiobacter K84 chromosome 1, complete genometwo-component sensor histidine kinase protein3e-25116
NC_009952:1984955:2006027200602720073461320Dinoroseobacter shibae DFL 12, complete genomehistidine kinase5e-25115
NC_008254:3143770:3162985316298531644511467Mesorhizobium sp. BNC1, complete genomeperiplasmic sensor signal transduction histidine kinase8e-24112
NC_016631:1757788:1768109176810917694521344Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-23111
NC_017986:2985514:2985514298551429868901377Pseudomonas putida ND6 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-22107
NC_014414:2569494:2584142258414225855031362Parvularcula bermudensis HTCC2503 chromosome, complete genomesensor histidine kinase2e-21103
NC_009092:4337617:4338364433836443396741311Shewanella loihica PV-4, complete genomeintegral membrane sensor signal transduction histidine kinase6e-1995.9
NC_014817:332000:3420803420803434501371Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceintegral membrane sensor signal transduction histidine kinase3e-1893.6
NC_017048:849000:8655018655018668051305Rickettsia prowazekii str. GvV257 chromosome, complete genomeosmolarity sensor protein EnvZ2e-1687.4
NC_017049:505000:5214795214795227831305Rickettsia prowazekii str. Chernikova chromosome, complete genomeosmolarity sensor protein EnvZ2e-1687.4
NC_017050:506500:5233655233655246691305Rickettsia prowazekii str. Katsinyian chromosome, complete genomeosmolarity sensor protein EnvZ2e-1687.4
NC_017051:505000:5214905214905227941305Rickettsia prowazekii str. Dachau chromosome, complete genomeosmolarity sensor protein EnvZ2e-1687.4
NC_017056:506500:5233445233445246481305Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeosmolarity sensor protein EnvZ2e-1687.4
NC_017057:507500:5235665235665248701305Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeosmolarity sensor protein EnvZ2e-1687.4
NC_000963:506500:5233625233625246751314Rickettsia prowazekii str. Madrid E, complete genomeOSMOLARITY SENSOR PROTEIN ENVZ (envZ)2e-1687.4
NC_015740:1594376:1610442161044216120431602Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completesensor histidine kinase2e-1583.6
NC_009434:1743696:1758650175865017602511602Pseudomonas stutzeri A1501, complete genomesensor histidine kinase4e-1583.2
NC_018080:4280401:4282240428224042838561617Pseudomonas aeruginosa DK2 chromosome, complete genometwo-component sensor3e-1480.1
NC_017058:862000:8620058620058632611257Rickettsia australis str. Cutlack chromosome, complete genomeosmolarity sensor protein EnvZ4e-1479.7
NC_002516:1236644:1256094125609412574521359Pseudomonas aeruginosa PAO1, complete genomeprobable two-component sensor4e-1479.7
NC_011770:4591500:4591517459151745928751359Pseudomonas aeruginosa LESB58, complete genomeputative two-component sensor4e-1479.7
NC_008463:4389721:4391560439156043929181359Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable two-component sensor4e-1479.7
NC_015410:3791500:3791677379167737932841608Pseudomonas mendocina NK-01 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1274.3
NC_005773:4282840:4282840428284042844501611Pseudomonas syringae pv. phaseolicola 1448A, complete genomesensor histidine kinase4e-1272.8
NC_012759:461680:4953114953114967531443Escherichia coli BW2952 chromosome, complete genomesensor kinase CusS9e-1272
NC_010473:623810:6451436451436465851443Escherichia coli str. K-12 substr. DH10B, complete genomesensory histidine kinase in two-component regulatory system with CusR, senses copper ions9e-1272
NC_013595:9651019:9672189967218996739701782Streptosporangium roseum DSM 43021, complete genomeHistidine kinase1e-1171.2
NC_013508:1862896:1863624186362418649341311Edwardsiella tarda EIB202, complete genomesensor protein2e-1170.9
NC_007510:2284000:2303497230349723048581362Burkholderia sp. 383 chromosome 1, complete sequenceperiplasmic sensor signal transduction histidine kinase3e-1170.1
NC_009439:3485000:3486042348604234876821641Pseudomonas mendocina ymp, complete genomeintegral membrane sensor signal transduction histidine kinase3e-1170.1
NC_012997:4906423:4907713490771349090171305Teredinibacter turnerae T7901, complete genomeperiplasmic sensor signal transduction histidine kinase7e-1168.9
NC_013739:5012394:5024461502446150259751515Conexibacter woesei DSM 14684, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1067.8
NC_020418:603750:6215276215276228971371Morganella morganii subsp. morganii KT, complete genomeCopper sensory histidine kinase CpxA2e-1067.8
NC_013971:1927510:1940603194060319418831281Erwinia amylovora ATCC 49946 chromosome, complete genometwo-component sensor kinase2e-1067.8
NC_013961:1891000:1903076190307619043561281Erwinia amylovora, complete genometwo component sensor kinase2e-1067.8
NC_015942:63440:6418664186654631278Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1067.4
NC_012214:1974500:1976290197629019775701281Erwinia pyrifoliae Ep1/96, complete genomeTwo-component regulatory system, sensor kinase3e-1066.6
NC_008820:1197898:1199688119968812010221335Prochlorococcus marinus str. MIT 9303, complete genometwo-component sensor histidine kinase4e-1066.6
NC_007802:1991211:2018857201885720200891233Jannaschia sp. CCS1, complete genomeperiplasmic sensor signal transduction histidine kinase8e-1065.5
NC_009654:2958316:2967749296774929690561308Marinomonas sp. MWYL1, complete genomeintegral membrane sensor signal transduction histidine kinase9e-1065.5
NC_007953:1434705:1456737145673714581221386Burkholderia xenovorans LB400 chromosome 3, complete sequenceHeavy metal sensor signal transduction histidine kinases (STHK)9e-1065.1
NC_004547:2285092:2285092228509222864051314Erwinia carotovora subsp. atroseptica SCRI1043, complete genometwo component sensor kinase1e-0964.7
NC_009654:1729159:1745508174550817468961389Marinomonas sp. MWYL1, complete genometwo-component sensor protein1e-0964.7
NC_014831:1906691:1915178191517819165631386Thermaerobacter marianensis DSM 12885 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0964.3
NC_005071:866468:8811218811218824431323Prochlorococcus marinus str. MIT 9313, complete genometwo-component sensor histidine kinase2e-0964.3
NC_015061:1481500:1504143150414315055401398Rahnella sp. Y9602 chromosome, complete genomeheavy metal sensor signal transduction histidine kinase2e-0963.9
NC_017047:1434500:1457047145704714584831437Rahnella aquatilis HX2 chromosome, complete genomeheavy metal sensor signal transduction histidine kinase2e-0963.9
NC_012560:3200961:3219556321955632207941239Azotobacter vinelandii DJ, complete genomesensory histidine protein kinase5e-0962.8
NC_021150:3200959:3219554321955432207921239Azotobacter vinelandii CA6, complete genomesensory histidine protein kinase5e-0962.8
NC_011146:3089297:3096485309648530978431359Geobacter bemidjiensis Bem, complete genomeheavy metal sensor signal transduction histidine kinase1e-0861.6
NC_009708:1403434:1421842142184214232271386Yersinia pseudotuberculosis IP 31758 chromosome, complete genomesignal transduction histidine-protein kinase BaeS1e-0861.6
NC_013722:1816561:1841066184106618421901125Xanthomonas albilineans, complete genomeprobable two component system sensor protein1e-0861.2
NC_015424:2726223:2745901274590127471151215Aeromonas veronii B565 chromosome, complete genomesensor histidine kinase TctE1e-0758.2
NC_015057:449699:4613974613974627731377Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequenceintegral membrane sensor signal transduction histidine kinase1e-0757.8
NC_013205:1123280:1157781115778111588631083Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,histidine kinase2e-0757.8
NC_007952:1416000:1435009143500914364091401Burkholderia xenovorans LB400 chromosome 2, complete sequenceHeavy metal sensor signal transduction histidine kinases (STHK)2e-0757.4
NC_013510:517878:5292285292285305891362Thermomonospora curvata DSM 43183, complete genomehistidine kinase2e-0757.4
NC_007973:1889076:1901477190147719028861410Ralstonia metallidurans CH34 chromosome 1, complete sequenceheavy metal sensor signal transduction histidine kinase3e-0757
NC_008699:1673181:1713139171313917145061368Nocardioides sp. JS614, complete genomeATP-binding region, ATPase domain protein domain protein4e-0756.6
NC_010634:3129174:3129174312917431305231350Yersinia pseudotuberculosis PB1/+, complete genomeintegral membrane sensor signal transduction histidine kinase5e-0756.2
NC_009708:1522281:1539549153954915408981350Yersinia pseudotuberculosis IP 31758 chromosome, complete genomesensor histidine kinase CpxA5e-0756.2
NC_016589:2824164:2852223285222328536531431Burkholderia sp. YI23 chromosome 1, complete sequencemulti-sensor signal transduction histidine kinase4e-0756.2
NC_008150:2451872:2451872245187224532211350Yersinia pestis Antiqua, complete genomeputative two-component system sensor kinase4e-0756.2
NC_005810:2905362:2905362290536229067111350Yersinia pestis biovar Microtus str. 91001, complete genomeputative two-component system sensor kinase4e-0756.2
NC_003143:3346834:3346834334683433481831350Yersinia pestis CO92, complete genomeputative two-component system sensor kinase4e-0756.2
NC_014029:3401238:3401238340123834025871350Yersinia pestis Z176003 chromosome, complete genomeputative two-component system sensor kinase4e-0756.2
NC_017154:3344273:3344273334427333456221350Yersinia pestis D106004 chromosome, complete genomeputative two-component system sensor kinase4e-0756.2
NC_017160:3326199:3326199332619933275481350Yersinia pestis D182038 chromosome, complete genomeputative two-component system sensor kinase4e-0756.2
NC_009925:6253059:6272000627200062734631464Acaryochloris marina MBIC11017, complete genometwo-component sensor histidine kinase8e-0755.5
NC_021184:549940:5565005565005578221323Desulfotomaculum gibsoniae DSM 7213, complete genomesignal transduction histidine kinase1e-0654.7
NC_008699:1673181:1697792169779216991531362Nocardioides sp. JS614, complete genomeATP-binding region, ATPase domain protein domain protein1e-0654.7
NC_013159:3554389:3556288355628835576371350Saccharomonospora viridis DSM 43017, complete genomesignal transduction histidine kinase2e-0654.3
NC_013161:2804228:2804228280422828076893462Cyanothece sp. PCC 8802, complete genomemethyl-accepting chemotaxis sensory transducer with GAF sensor3e-0653.5
NC_017986:3283433:3285429328542932867571329Pseudomonas putida ND6 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase3e-0653.5
NC_011892:306437:3193283193283205751248Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completehistidine kinase3e-0653.5
NC_020211:1621000:1621795162179516232131419Serratia marcescens WW4, complete genomeheavy metal sensor signal transduction histidine kinase3e-0653.5
NC_012587:3177583:3181521318152131827681248Rhizobium sp. NGR234, complete genomesensor protein5e-0652.8
NC_014618:1700784:1715136171513617165391404Enterobacter cloacae SCF1 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase6e-0652.4
NC_012030:400515:4168164168164182521437Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase6e-0652.4
NC_002927:5327094:5330938533093853323531416Bordetella bronchiseptica RB50, complete genomeputative sensor kinase protein7e-0652.4
NC_003296:1461538:1461538146153814630761539Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN8e-0652
NC_015690:1818333:1838133183813318394281296Paenibacillus mucilaginosus KNP414 chromosome, complete genomesensory transduction histidine kinase8e-0652
NC_016935:2347691:2368004236800423693381335Paenibacillus mucilaginosus 3016 chromosome, complete genomesensory transduction histidine kinase1e-0552