Pre_GI Gene

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Host: NC_015410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:3791500 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
379167737932841608integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
37932813793865585ribosomal-protein-amino-adic N-acetyltransferaseQuickGO ontologyBLASTP
37938623794587726two component transcriptional regulatorQuickGO ontologyBLASTP
379535137982572907ribonucleotide-diphosphate reductase subunit alphaQuickGO ontologyBLASTP
379876638000161251ribonucleotide-diphosphate reductase subunit betaQuickGO ontologyBLASTP
380012438012631140hypothetical proteinBLASTP
38022163802983768hypothetical protein
38034353804370936hypothetical protein
38044403805099660hypothetical protein
38051543805315162hypothetical proteinBLASTP
38053263805661336hypothetical proteinBLASTP
380590638070901185diguanylate cyclaseQuickGO ontologyBLASTP
38072183807913696acetyltransferaseQuickGO ontologyBLASTP
38081133808970858hypothetical proteinBLASTP
380916338105721410oxidoreductase FAD-bindingQuickGO ontologyBLASTP
38105723811165594hypothetical protein
38112053812071867LysR family transcriptional regulatorQuickGO ontologyBLASTP
38122243812925702NADPH dehydrogenaseQuickGO ontologyBLASTP