Pre_GI: BLASTP Hits

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Query: NC_012731:2083650:2089612 Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome

Start: 2089612, End: 2090754, Length: 1143

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a liver abscess. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:1177946:1182443118244311835851143Escherichia coli S88 chromosome, complete genomephage integrase0682
NC_007946:1239278:1241467124146712426091143Escherichia coli UTI89, complete genomeprophage lambda integrase0682
NC_008563:1175035:1178855117885511799971143Escherichia coli APEC O1, complete genomeprophage lambda integrase0682
NC_011751:1405381:1411252141125214123941143Escherichia coli UMN026 chromosome, complete genomephage integrase0681
NC_014562:983398:9899719899719911161146Pantoea vagans C9-1 chromosome, complete genomeIntegrase7e-175613
AC_000091:1191353:1201256120125612023831128Escherichia coli W3110 DNA, complete genomepredicted integrase2e-132472
NC_000913:1188999:1198902119890212000291128Escherichia coli K12, complete genomee14 prophage; predicted integrase2e-132472
NC_016612:3803130:3809103380910338102301128Klebsiella oxytoca KCTC 1686 chromosome, complete genomesite-specific recombinase, phage integrase family protein3e-130465
NC_007712:2897000:2906392290639229075161125Sodalis glossinidius str. 'morsitans', complete genomephage integrase2e-128458
NC_013282:1804909:1812665181266518138131149Cronobacter turicensis, complete genomeProphage lambda integrase7e-126450
NC_017060:59500:1055351055351066591125Rahnella aquatilis HX2 plasmid PRA1, complete sequencelambda integrase2e-116419
NC_015062:99969:1087051087051098291125Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencelambda integrase5e-116417
NC_009801:1392696:1417903141790314190331131Escherichia coli E24377A, complete genomesite-specific recombinase, phage integrase family2e-114412
NC_013364:1997891:1998117199811719992471131Escherichia coli O111:H- str. 11128, complete genomeputative integrase4e-114411
CU928145:1408280:1408280140828014094101131Escherichia coli 55989 chromosome, complete genomephage integrase4e-114411
NC_011748:1408280:1408280140828014094101131Escherichia coli 55989, complete genomephage integrase4e-114411
NC_013008:1715831:1736291173629117374211131Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase for prophage CP-933O2e-113409
NC_011353:1716037:1737316173731617384461131Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family2e-113409
NC_011283:2836000:2907727290772729088661140Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase2e-108392
NC_014838:218000:2249612249612261031143Pantoea sp. At-9b plasmid pPAT9B01, complete sequencelambda integrase2e-100366
NC_020418:2910593:291768229176822918563882Morganella morganii subsp. morganii KT, complete genomePhage integrase2e-100365
NC_009832:2211154:222325822232582224040783Serratia proteamaculans 568, complete genomeintegrase family protein1e-92340
NC_011740:1831845:184836618483661848854489Escherichia fergusonii ATCC 35469, complete genome1e-73276
NC_013364:2898964:2916736291673629178061071Escherichia coli O111:H- str. 11128, complete genomeputative integrase3e-65249
NC_011601:1039500:1043517104351710445901074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase3e-65249
NC_011770:1431740:1433854143385414349571104Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative8e-62238
NC_013941:975353:9807899807899818591071Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family2e-53209
NC_012967:786534:7879527879527890221071Escherichia coli B str. REL606 chromosome, complete genomeintegrase2e-53209
NC_011601:717072:7208917208917219611071Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase6e-53208
NC_011080:1944226:1972465197246519735441080Salmonella enterica subsp. enterica serovar Newport str. SL254,phage integrase7e-51201
NC_013850:1887556:1893425189342518945101086Klebsiella variicola At-22 chromosome, complete genomelambda integrase5e-51201
NC_011205:1391971:1399187139918714002661080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase3e-50199
NC_011205:1345511:1351456135145613525351080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage integrase3e-50199
NC_011294:1220526:1226471122647112275501080Salmonella enterica subsp. enterica serovar Enteritidis strintegrase4e-50198
NC_007712:1516589:1520735152073515218021068Sodalis glossinidius str. 'morsitans', complete genomephage integrase3e-49196
NC_010102:1137247:1149438114943811505171080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-49195
NC_011094:1923870:1945403194540319464821080Salmonella enterica subsp. enterica serovar Schwarzengrund strphage integrase5e-49195
NC_011353:1716037:172511817251181725858741Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-47190
NC_003197:1945858:196702619670261967922897Salmonella typhimurium LT2, complete genome2e-47189
NC_016810:1903426:192459419245941925490897Salmonella enterica subsp. enterica serovar Typhimurium strIntegrase2e-47189
NC_016856:1957263:197843119784311979327897Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sintegrase2e-47189
NC_016857:1903426:192459419245941925490897Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage integrase protein2e-47189
NC_016863:1905454:192662219266221927518897Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage integrase protein2e-47189
NC_017046:1902788:192395719239571924853897Salmonella enterica subsp. enterica serovar Typhimurium str. 798Integrase2e-47189
NC_016860:1943203:196260919626091963463855Salmonella enterica subsp. enterica serovar Typhimurium strintegrase1e-46187
NC_011083:1993672:201608920160892016943855Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,integrase1e-46187
NC_013941:1613595:162264716226471623387741Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeintegrase2e-46186
NC_002655:2264773:228294922829492283650702Escherichia coli O157:H7 EDL933, complete genomeputative integrase fragment6e-46185
NC_002695:1794635:180352718035271804219693Escherichia coli O157:H7 str. Sakai, complete genomeintegrase8e-46184
NC_013008:1715831:172409317240931724785693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase8e-46184
NC_013361:1754346:176509417650941765786693Escherichia coli O26:H11 str. 11368 chromosome, complete genome8e-46184
NC_011601:1466496:147555814755581476250693Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome9e-45181
NC_020418:2868000:287747828774782877876399Morganella morganii subsp. morganii KT, complete genomePhage integrase3e-44179
NC_008258:1873805:1886389188638918874651077Shigella flexneri 5 str. 8401, complete genomeputative phage integrase protein3e-43176
NC_003198:1908238:1932482193248219335581077Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative integrase5e-43175
NC_012791:2590500:2590574259057425916621089Variovorax paradoxus S110 chromosome 1, complete genomeintegrase family protein2e-42173
NC_010102:1137247:114318211431821144009828Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-42173
NC_007650:1192310:1197986119798611991131128Burkholderia thailandensis E264 chromosome II, complete sequenceintegrase-like protein1e-42173
NC_013422:1755875:1797967179796717991241158Halothiobacillus neapolitanus c2, complete genomelambda integrase1e-41170
NC_013508:1687432:1700197170019717012911095Edwardsiella tarda EIB202, complete genomeputative phage integrase protein3e-38159
NC_012779:1966205:1973860197386019749541095Edwardsiella ictaluri 93-146, complete genomeintegrase2e-37156
NC_012947:3015985:302838230283823029305924Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda integrase4e-37155
NC_011770:2499432:2540392254039225415041113Pseudomonas aeruginosa LESB58, complete genomephage integrase, putative4e-37155
NC_016831:1690811:171376217137621714373612Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-31135
NC_012125:1897611:190354519035451904273729Salmonella enterica subsp. enterica serovar Paratyphi C strainphage integrase protein9e-31134
NC_017506:2089769:2107666210766621087871122Marinobacter adhaerens HP15 chromosome, complete genomeprophage lambda integrase4e-30132
NC_006511:1063249:106919410691941070035842Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-27122
NC_013364:1997891:201108120110812011473393Escherichia coli O111:H- str. 11128, complete genome4e-24112
NC_011080:1944226:195729619572961957808513Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-23111
NC_007974:1007834:102021810202181020673456Ralstonia metallidurans CH34 chromosome 2, complete sequencephage integrase4e-22105
NC_007712:1791766:179714417971441797914771Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-21103
NC_009778:959982:9698359698359710191185Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1584.3
NC_015566:3659318:3669051366905136702291179Serratia sp. AS12 chromosome, complete genomehypothetical protein5e-1582.4
NC_007645:4677965:469104446910444691523480Hahella chejuensis KCTC 2396, complete genomeIntegrase2e-1480.9
NC_006512:728281:7344067344067355571152Idiomarina loihiensis L2TR, complete genomeIntegrase4e-1169.3
NC_015379:4691868:470798047079804708960981Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative integrase7e-1168.6
NC_011083:1993672:200564220056422006010369Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein8e-1168.6
NC_003197:1945858:195783519578351958203369Salmonella typhimurium LT2, complete genome8e-1168.6
NC_011080:1944226:196285119628511963219369Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein8e-1168.6
NC_016810:1903426:191540319154031915771369Salmonella enterica subsp. enterica serovar Typhimurium str8e-1168.6
NC_016860:1943203:195518019551801955548369Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein8e-1168.6
NC_016863:1905454:191743119174311917799369Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein8e-1168.6
NC_011147:1057259:107796010779601078328369Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1067
NC_006511:1063249:108395010839501084318369Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cytoplasmic protein2e-1067
NC_006905:1961774:197374719737471974115369Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-0963.5
NC_017033:1052000:1053148105314810541671020Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific recombinase XerC6e-0858.9
NC_016856:1957263:196927919692791969608330Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-0757.8
NC_016857:1903426:191544219154421915771330Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-0757.8
NC_017046:1902788:191480419148041915133330Salmonella enterica subsp. enterica serovar Typhimurium str. 7981e-0757.8
NC_011147:1057259:106945410694541069783330Salmonella enterica subsp. enterica serovar Paratyphi A str3e-0756.6
NC_006511:1063249:107544410754441075773330Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage integrase protein3e-0756.6
NC_012947:3015985:303373730337373033898162Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete4e-0756.2
NC_011149:1236689:123668912366891237048360Salmonella enterica subsp. enterica serovar Agona str. SL483,integrase4e-0756.2
NC_011294:2053991:205795920579592058948990Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase5e-0755.8
NC_011205:2180598:218594621859462186935990Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase protein5e-0755.8
NC_010501:4379920:4392912439291243939341023Pseudomonas putida W619, complete genomeintegrase family protein7e-0755.5
NC_013508:1687432:169951816995181699856339Edwardsiella tarda EIB202, complete genomeputative phage integrase protein1e-0654.7
NC_012125:1897611:190945919094591909728270Salmonella enterica subsp. enterica serovar Paratyphi C strainphage integrase protein5e-0652.8