Pre_GI: BLASTP Hits

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Query: NC_012668:1623350:1650343 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1650343, End: 1651119, Length: 777

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011663:3181579:320260832026083203381774Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-61236
NC_008322:2983951:300111730011173001890774Shewanella sp. MR-7, complete genomeprotein of unknown function DUF814e-59228
NC_014012:3356629:337150033715003372273774Shewanella violacea DSS12, complete genomehypothetical protein1e-58226
NC_008577:3125675:314095731409573141730774Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF813e-58225
NC_009092:2902171:292448029244802925253774Shewanella loihica PV-4, complete genomeprotein of unknown function DUF815e-58224
NC_008321:2922000:294043429404342941207774Shewanella sp. MR-4, complete genomeprotein of unknown function DUF816e-58224
NC_017068:130226:132382132382133146765Selenomonas ruminantium subsp. lactilytica TAM6421, completemembrane protein8e-31134
NC_012779:2619871:262328626232862624086801Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-28126
NC_016513:1859767:187470318747031875470768Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeinner membrane protein YfcA1e-28126
NC_013416:1526920:153955315395531540320768Aggregatibacter actinomycetemcomitans D11S-1, complete genomeinner membrane protein YfcA1e-28126
NC_012125:1360593:138650113865011387310810Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-28125
NC_014330:2409559:240955924095592410326768Brachyspira pilosicoli 95/1000 chromosome, complete genometransporter membrane7e-27120
NC_019908:852230:869858869858870625768Brachyspira pilosicoli P43/6/78 chromosome, complete genometransporter membrane8e-27120
NC_015437:697051:697051697051697809759Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF813e-26118
NC_014618:1452927:147452414745241475333810Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-25116
NC_010674:3674739:367944636794463680195750Clostridium botulinum B str. Eklund 17B, complete genometransporter1e-24113
NC_010723:3530000:353662735366273537376750Clostridium botulinum E3 str. Alaska E43, complete genometransporter3e-24112
NC_017200:345502:351091351091351861771Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein9e-22103
NC_016779:312500:318945318945319715771Bacillus cereus F837/76 chromosome, complete genomehypothetical protein1e-21103
NC_013959:1555799:157281115728111573578768Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function DUF811e-20100
NC_015733:3736104:373949737394973740327831Pseudomonas putida S16 chromosome, complete genomehypothetical protein7e-21100
NC_015556:2265940:227547522754752276242768Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF814e-2098.6
NC_008027:2331617:235545623554562356217762Pseudomonas entomophila L48, complete genomehypothetical protein8e-2097.4
NC_014210:2638773:263961626396162640383768Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF812e-1996.3
NC_010572:5445081:546529154652915466085795Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-1995.5
NC_010172:4185904:419190041919004192691792Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF818e-1994.4
NC_012988:4633930:463860746386074639398792Methylobacterium extorquens DM4, complete genomehypothetical protein8e-1994.4
NC_002505:2537655:254839525483952549180786Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-1894
NC_009457:2095366:210162721016272102412786Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-1894
NC_012578:2479150:248541124854112486196786Vibrio cholerae M66-2 chromosome I, complete sequenceputative Inner membrane protein1e-1894
NC_012582:2626786:263304726330472633832786Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative Inner membrane protein1e-1894
NC_012668:1036000:104548610454861046271786Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1894
NC_016445:2012294:201855220185522019337786Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-1894
NC_016944:2588435:259469325946932595478786Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-1894
NC_012808:4235567:424024642402464241037792Methylobacterium extorquens AM1, complete genomehypothetical protein2e-1892.8
NC_007164:622000:652500652500653294795Corynebacterium jeikeium K411, complete genomehypothetical protein4e-1891.7
NC_015379:4630367:463117146311714631935765Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative membrane protein4e-1891.7
NC_015276:1037862:104442710444271045206780Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF815e-1891.3
NC_003919:5056650:508042750804275081206780Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-1890.9
NC_011757:4293000:429544942954494296240792Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF812e-1789.7
NC_010644:231486:234531234531235283753Elusimicrobium minutum Pei191, complete genomehypothetical protein4e-1685.1
NC_013421:1143500:115253411525341153298765Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF812e-1582.8
NC_015677:285896:302473302473303231759Ramlibacter tataouinensis TTB310 chromosome, complete genomemembrane protein2e-1582.8
NC_015434:3581001:359625935962593597038780Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein1e-1480.5
NC_014391:3596812:361355136135513614270720Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein2e-1479.3
NC_014815:5603000:561002456100245610743720Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-1479.3
NC_004547:1062410:106241010624101063174765Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-1479
NC_020209:945000:952807952807953370564Pseudomonas poae RE*1-1-14, complete genomehypothetical protein5e-1168.2
NC_009718:643200:668532668532669269738Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein5e-0858.2
NC_015978:32875:503315033150852522Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein6e-0651.6