Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:894955:923358 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 923358, End: 924191, Length: 834

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2713937:271768527176852718497813Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein1e-134479
NC_006511:2718401:272214927221492722961813Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene1e-134479
NC_011080:2870428:287302028730202873853834Salmonella enterica subsp. enterica serovar Newport str. SL254,retron EC67 DNA adenine methylase9e-104376
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-66251
NC_003197:2870268:287268828726882873545858Salmonella typhimurium LT2, complete genomeDNA adenine methylase-like protein6e-64244
NC_016860:2896254:289625428962542897111858Salmonella enterica subsp. enterica serovar Typhimurium strDNA adenine methylase-like protein6e-64244
NC_011742:2823000:282628628262862827203918Escherichia coli S88 chromosome, complete genomeadenine-specific DNA-methyltransferase4e-64244
NC_011601:846358:858598858598859455858Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA adenine methylase2e-63242
NC_011205:2938356:295087429508742951731858Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853retron adenine methylase2e-63242
NC_011149:2802199:281568228156822816539858Salmonella enterica subsp. enterica serovar Agona str. SL483,retron EC67 DNA adenine methylase3e-63241
NC_003198:4453457:450222945022294503089861Salmonella enterica subsp. enterica serovar Typhi str. CT18,DNA adenine methylase3e-63241
NC_006511:2677964:269045226904522691312861Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCDNA adenine methylase3e-63241
NC_011147:2676972:268598826859882686848861Salmonella enterica subsp. enterica serovar Paratyphi A strDNA adenine methylase3e-63241
NC_014306:1244721:125156412515641252418855Erwinia billingiae Eb661, complete genomeDNA adenine methylase1e-62239
NC_006155:2208686:221133022113302212148819Yersinia pseudotuberculosis IP 32953, complete genomeputative DNA adenine methylase5e-62237
NC_020260:312805:322401322401323261861Cronobacter sakazakii Sp291, complete genomeDNA adenine methylase2e-61236
NC_016810:2871689:288363128836312884488858Salmonella enterica subsp. enterica serovar Typhimurium strDNA adenine methylase3e-61235
NC_016857:2871689:288363128836312884488858Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA adenine methylase3e-61235
NC_017046:2869873:288237328823732883230858Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA adenine methylase3e-61235
NC_010634:2124185:212759721275972128415819Yersinia pseudotuberculosis PB1/+, complete genomeDNA adenine methylase3e-60231
NC_013956:3525711:354035335403533541147795Pantoea ananatis LMG 20103 chromosome, complete genomeDam2e-57222
NC_020418:3022891:303872430387243039533810Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-50198
NC_017167:1648913:172520017252001726039840Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA adenine methylase6e-49194
NC_013205:1123280:118453211845321185350819Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA adenine methylase3e-48192
NC_017167:2298962:233298323329832333840858Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA adenine methylase8e-45180
NC_013205:576583:599138599138599956819Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA adenine methylase8e-45180
NC_014125:766576:793582793582794400819Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeDNA adenine methylase2e-44179
NC_009494:775676:807543807543808361819Legionella pneumophila str. Corby chromosome, complete genomeDNA adenine methylase2e-44179
NC_007974:2048000:207887020788702079667798Ralstonia metallidurans CH34 chromosome 2, complete sequenceDNA adenine methylase3e-40165
NC_007712:2028500:203029720302972030989693Sodalis glossinidius str. 'morsitans', complete genomeputative DNA adenine methylase7e-38157
NC_007613:761234:765949765949766497549Shigella boydii Sb227, complete genomeputative DNA adenine methylase5e-36151
NC_011295:1263500:127563212756321276579948Coprothermobacter proteolyticus DSM 5265, complete genomemodification methylase MjaIII (Adenine-specificmethyltransferase MjaIII) (M.MjaIII)4e-33141
NC_013192:2381901:2396751239675123981871437Leptotrichia buccalis DSM 1135, complete genomeDNA adenine methylase7e-33140
NC_009328:2161116:217781121778112178653843Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeadenine-specific DNA methyltransferase1e-31136
NC_014306:103545:110666110666111157492Erwinia billingiae Eb661, complete genomePutative DNA adenine methylase2e-31136
NC_004557:363628:380624380624381466843Clostridium tetani E88, complete genomeputative adenine-specific DNA methyltransferase1e-30133
NC_017095:1757935:175994617599461760926981Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeDNA adenine methylase Dam6e-30131
NC_009012:2927793:294181129418112942653843Clostridium thermocellum ATCC 27405, complete genomeDNA adenine methylase2e-29129
NC_015216:652266:667337667337668245909Methanobacterium sp. AL-21 chromosome, complete genomeDNA adenine methylase4e-29128
NC_012962:4942000:496180649618064962285480Photorhabdus asymbiotica, complete genomeputative DNA adenine methylase4e-29128
NC_013665:1591081:162267616226761623614939Methanocella paludicola SANAE, complete genomeadenine-specific methyltransferase8e-28124
NC_015574:1676798:167679816767981677739942Methanobacterium sp. SWAN-1 chromosome, complete genomeDNA adenine methylase2e-27123
NC_008497:32160:4830348303493281026Lactobacillus brevis ATCC 367, complete genomeSite-specific DNA methylase2e-27122
NC_014751:946155:968124968124968900777Mycoplasma leachii PG50 chromosome, complete genomeDNA adenine methylase6e-27121
NC_017045:1:114901149012416927Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA adenine methylase2e-26119
NC_014963:4091910:411297341129734113785813Terriglobus saanensis SP1PR4 chromosome, complete genomeDNA adenine methylase3e-26119
NC_015573:2463123:247378724737872474626840Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA adenine methylase3e-26119
NC_009437:685214:702936702936703808873Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeDNA adenine methylase8e-26117
NC_010085:1358772:136632213663221367164843Nitrosopumilus maritimus SCM1, complete genomeDNA adenine methylase2e-25115
NC_007517:3524715:3535829353582935377451917Geobacter metallireducens GS-15, complete genomeDNA adenine methylase5e-25115
NC_009659:3815966:3825792382579238276961905Janthinobacterium sp. Marseille chromosome, complete genomeDNA adenine methylase3e-24112
NC_010673:479552:490263490263491081819Borrelia hermsii DAH, complete genomemodification methylase LlaDCHIA5e-24111
NC_011244:497212:505022505022505846825Borrelia recurrentis A1, complete genomeputative adenine-specific DNA methyltransferase2e-23109
NC_015437:697051:7041617041617052281068Selenomonas sputigena ATCC 35185 chromosome, complete genomeDNA adenine methylase4e-23108
NC_010175:1603500:160460416046041605482879Chloroflexus aurantiacus J-10-fl, complete genomeDNA adenine methylase3e-23108
NC_012032:1602812:160576016057601606638879Chloroflexus sp. Y-400-fl, complete genomeDNA adenine methylase3e-23108
NC_007681:153476:167844167844168782939Methanosphaera stadtmanae DSM 3091, complete genomeputative type II restriction-modification system, adenine-specific DNA methyltransferase6e-23107
NC_018870:484000:501570501570502397828Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA adenine methylase Dam2e-22106
NC_007908:1946902:195719019571901958011822Rhodoferax ferrireducens T118, complete genomeDNA adenine methylase5e-21101
NC_014033:1152994:117025111702511171177927Prevotella ruminicola 23 chromosome, complete genomeDNA adenine methylase1e-20100
NC_015873:1119500:112745011274501128292843Megasphaera elsdenii DSM 20460, complete genomeadenine-specific DNA methyltransferase1e-20100
NC_009051:1455183:147118414711841472035852Methanoculleus marisnigri JR1, complete genomeDNA adenine methylase5e-2098.2
NC_007963:1552761:156348015634801564292813Chromohalobacter salexigens DSM 3043, complete genomeDNA adenine methylase6e-2098.2
NC_012778:1819559:183398418339841834817834Eubacterium eligens ATCC 27750, complete genomeDNA adenine methylase7e-2097.8
NC_014931:4490526:449619444961944497003810Variovorax paradoxus EPS chromosome, complete genomeDNA adenine methylase3e-1995.9
NC_007948:3502843:350924035092403510055816Polaromonas sp. JS666, complete genomeDNA adenine methylase6e-1994.7
NC_009767:2866668:288354828835482884492945Roseiflexus castenholzii DSM 13941, complete genomeDNA adenine methylase2e-1893.2
NC_015656:2795784:280235528023552803233879Frankia symbiont of Datisca glomerata chromosome, complete genomeDNA adenine methylase1e-1687
NC_007948:3541987:354798935479893548813825Polaromonas sp. JS666, complete genomeDNA adenine methylase2e-1686.7
NC_015510:2907815:292062329206232921420798Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeDNA adenine methylase8e-1684.3
NC_009943:940835:949994949994950749756Candidatus Desulfococcus oleovorans Hxd3, complete genomeDNA adenine methylase2e-1582.8
NC_013165:2240377:227190822719082272825918Slackia heliotrinireducens DSM 20476, complete genomeDNA adenine methylase Dam6e-1581.6
NC_019904:1616742:162405716240571624908852Echinicola vietnamensis DSM 17526 chromosome, complete genomeDNA adenine methylase Dam5e-1581.6
NC_010793:1922000:192615419261541926963810Orientia tsutsugamushi str. Ikeda, complete genomeN6 adenine-specific DNA-methyltransferase6e-1375.1
NC_015311:1101761:111468411146841115541858Prevotella denticola F0289 chromosome, complete genomeDNA adenine methylase1e-1273.9
NC_015501:938196:946578946578947486909Porphyromonas asaccharolytica DSM 20707 chromosome, completeDNA adenine methylase1e-1273.6
NC_013450:854790:855889855889856452564Staphylococcus aureus subsp. aureus ED98, complete genomeputative methylase3e-1272.8
NC_014910:3727887:374454637445463745481936Alicycliphilus denitrificans BC chromosome, complete genomeDNA adenine methylase3e-1065.9
NC_012846:986877:102308310230831023868786Bartonella grahamii as4aup, complete genomeadenine-specific DNA methyltransferase8e-0961.2
NC_010544:262000:283999283999284811813Candidatus Phytoplasma australiense, complete genomeSite-specific DNA methylase4e-0858.9
NC_014364:2111685:212945021294502129836387Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase4e-0858.5
NC_012846:986877:102167210216721022487816Bartonella grahamii as4aup, complete genomeadenine-specific DNA methyltransferase8e-0857.8
NC_012559:1663214:167124416712441672011768Laribacter hongkongensis HLHK9, complete genomeProbable methyltransferase8e-0857.8
NC_012030:81837:104041104041104895855Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeD12 class N6 adenine-specific DNA methyltransferase3e-0755.8
NC_012724:2202173:221359022135902214381792Burkholderia glumae BGR1 chromosome 1, complete genomeGp2725e-0755.5
NC_015381:2109500:211653721165372117322786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase7e-0754.7
NC_003210:2380419:239181323918132392625813Listeria monocytogenes EGD-e, complete genomehypothetical protein7e-0754.7
NC_015381:3091500:311175631117563112541786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp278e-0754.3
NS_000195:526983:557148557148557969822Candidatus Cloacamonas acidaminovoransputative N6 adenine-specific DNA methyltransferase, D12 class1e-0653.9
NC_015381:1202061:121846112184611219246786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase1e-0653.9
NC_015381:3457784:347117134711713471956786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp272e-0653.5
NC_003212:57061:862908629087102813Listeria innocua Clip11262, complete genomehypothetical protein2e-0653.5
NC_015856:1152021:117670911767091177263555Collimonas fungivorans Ter331 chromosome, complete genomeprophage PSPPH02 adenine modification methytransferase2e-0653.1
NC_007651:2166000:216831721683172169288972Burkholderia thailandensis E264 chromosome I, complete sequenceDNA adenine methylase3e-0652.8
NC_002927:3827211:383460238346023835393792Bordetella bronchiseptica RB50, complete genomemodification methylase4e-0652.4