Pre_GI Gene

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Host: NC_011244 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011244:497212 Borrelia recurrentis A1, complete genome

Host Lineage: Borrelia recurrentis; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia recurrentis isolated from adult patient with louse-borne relapsing fever in Ethiopia. Borrelia recurrentis is the causative agent of louse-borne relapsing fever. Prior to World War II, this organism was responsible for large disease outbreaks with a mortality of up to 40% in much of the world. Currently this disease is limited to parts of Africa, China, and Peru. B. recurrentis is transmitted when infected human body lice (Pediculus humanus) are crushed and their fluids contaminate mucous membranes or breaks in the skin. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4972124987291518hypothetical proteinBLASTP
4986655000291365hypothetical proteinBLASTP
50025450033986tRNA-SerQuickGO ontology
500352501083732putative lipoproteinQuickGO ontologyBLASTP
50120650127974tRNA-ArgQuickGO ontology
50129550138187tRNA-SerQuickGO ontologyBLASTP
5016285032951668DNA polymerase III subunits gamma and tauQuickGO ontologyBLASTP
503298503597300hypothetical proteinBLASTP
503601504185585recombination protein RecRQuickGO ontologyBLASTP
504437505018582nucleoside diphosphate kinaseQuickGO ontologyBLASTP
505022505846825putative adenine-specific DNA methyltransferaseQuickGO ontologyBLASTP
506060506596537hypothetical proteinBLASTP
506593507288696hypothetical proteinBLASTP
507224508057834ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
508054508743690hypothetical proteinBLASTP
508745509491747hypothetical proteinBLASTP
509501510013513signal peptidase IIQuickGO ontologyBLASTP
510010510234225hypothetical proteinBLASTP
510249511067819hypothetical proteinBLASTP
5111265124061281UDP-N-acetylglucosamine 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
5126435140011359hypothetical proteinBLASTP
514148514471324hypothetical proteinBLASTP
5148195160031185elongation factor TuQuickGO ontologyBLASTP
51604951636031230S ribosomal protein S10QuickGO ontologyBLASTP
51639451702363050S ribosomal protein L3QuickGO ontologyBLASTP
51702551765463050S ribosomal protein L4QuickGO ontologyBLASTP
51767651797229750S ribosomal protein L23QuickGO ontologyBLASTP
51799151882483450S ribosomal protein L2QuickGO ontologyBLASTP
51883451911227930S ribosomal protein S19QuickGO ontologyBLASTP
51911951948136350S ribosomal protein L22QuickGO ontologyBLASTP
51948552031583130S ribosomal protein S3QuickGO ontologyBLASTP
52033452075041750S ribosomal protein L16QuickGO ontologyBLASTP