Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:2713937 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
271216527139401776phage proteinQuickGO ontologyBLASTP
271393727149981062phage proteinQuickGO ontologyBLASTP
27150492715318270phage proteinQuickGO ontologyBLASTP
271562327171551533phage proteinQuickGO ontologyBLASTP
27176852718497813phage proteinQuickGO ontologyBLASTP
27198392720369531phage proteinQuickGO ontologyBLASTP
272129727223101014bacteriophage integraseQuickGO ontologyBLASTP
27239822724521540Flagellar synthesis repressor of fliCQuickGO ontologyBLASTP
272458927261091521flagellinQuickGO ontologyBLASTP
272773527288501116glycosyltransferaseQuickGO ontologyBLASTP
272893127325873657ABC transporterQuickGO ontologyBLASTP