Pre_GI: BLASTP Hits

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Query: NC_011988:924721:933039 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 933039, End: 933114, Length: 76

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007761:3564449:357587835758783576052175Rhizobium etli CFN 42, complete genometRNA-Ala2e-0651.6
NC_007761:3962474:397283939728393973013175Rhizobium etli CFN 42, complete genometRNA-Ala2e-0651.6
NC_007761:57199:643746437464548175Rhizobium etli CFN 42, complete genometRNA-Ala2e-0651.6
NC_015183:2483653:24965102496510249658576Agrobacterium sp. H13-3 chromosome, complete genometRNA-Ala3e-0650.8
NC_010994:57362:64713647136478876Rhizobium etli CIAT 652, complete genometRNA-Ala3e-0650.8
NC_015183:51500:59207592075928276Agrobacterium sp. H13-3 chromosome, complete genometRNA-Ala3e-0650.8
NC_011988:1036618:10466281046628104670376Agrobacterium vitis S4 chromosome 2, complete genometRNA-Ala3e-0650.8
NC_003063:757999:76844676844676852176Agrobacterium tumefaciens str. C58 chromosome linear, completetRNA-Ala3e-0650.8
NC_003047:2798367:28094562809456280953176Sinorhizobium meliloti 1021, complete genometRNA-Ala3e-0650.8
NC_010994:3666651:36773213677321367739676Rhizobium etli CIAT 652, complete genometRNA-Ala3e-0650.8
NC_012850:3867743:38792103879210387928576Rhizobium leguminosarum bv. trifolii WSM1325, complete genometRNA-Ala3e-0650.8
NC_003047:3202125:32123103212310321238576Sinorhizobium meliloti 1021, complete genometRNA-Ala3e-0650.8
NC_012850:3454270:34643453464345346442076Rhizobium leguminosarum bv. trifolii WSM1325, complete genometRNA-Ala3e-0650.8
NC_008380:4532969:45443564544356454443176Rhizobium leguminosarum bv. viciae 3841, complete genometRNA-Ala3e-0650.8
NC_012850:4422966:44310114431011443108676Rhizobium leguminosarum bv. trifolii WSM1325, complete genometRNA-Ala3e-0650.8
NC_012587:2744731:27560082756008275608376Rhizobium sp. NGR234, complete genometRNA-Ala3e-0650.8
NC_003305:1297785:13062351306235130631379Agrobacterium tumefaciens str. C58 chromosome linear, completetRNA-Ala2e-0650.8
NC_003304:51048:58688586885876679Agrobacterium tumefaciens str. C58 chromosome circular, completetRNA-Ala2e-0650.8
NC_003305:1035342:10437521043752104383079Agrobacterium tumefaciens str. C58 chromosome linear, completetRNA-Ala2e-0650.8
NC_003062:2506959:25164042516404251647976Agrobacterium tumefaciens str. C58 chromosome circular, completetRNA-Ala3e-0650.8
NC_010994:4071131:40812904081290408136576Rhizobium etli CIAT 652, complete genometRNA-Ala3e-0650.8
NC_008380:58232:65632656326570776Rhizobium leguminosarum bv. viciae 3841, complete genometRNA-Ala3e-0650.8
NC_003063:1019674:10309291030929103100476Agrobacterium tumefaciens str. C58 chromosome linear, completetRNA-Ala3e-0650.8
NC_012587:3613162:36228793622879362295476Rhizobium sp. NGR234, complete genometRNA-Ala3e-0650.8
NC_003062:50756:58487584875856276Agrobacterium tumefaciens str. C58 chromosome circular, completetRNA-Ala3e-0650.8
NC_003047:74986:83723837238379876Sinorhizobium meliloti 1021, complete genometRNA-Ala3e-0650.8
NC_008380:4078670:40892764089276408935176Rhizobium leguminosarum bv. viciae 3841, complete genometRNA-Ala3e-0650.8