Pre_GI Gene

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Host: NC_007761 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007761:3962474 Rhizobium etli CFN 42, complete genome

Host Lineage: Rhizobium etli; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It is a nitrogen-fixing symbiotic bacteria that interacts with the root of the common bean plant Phaseolus vulgaris. P. etli and its relation to other nitrogen/fixing symbionts has been well studied. The genomic sequence will provide information on the process of symbiosis, on the genetic systems that allow the survival and adaptations of this bacteria to the soil, and on the evolutionary relationship and the symbiosis origin of this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39619633962481519NADH-ubiquinone oxidoreductase chain E proteinQuickGO ontologyBLASTP
396247439637361263NADH-ubiquinone oxidoreductase chain F proteinQuickGO ontologyBLASTP
396376739663462580NADH-ubiquinone oxidoreductase chain G proteinQuickGO ontologyBLASTP
39664193966859441hypothetical proteinBLASTP
39669053967471567probable NADH-ubiquinone oxidoreductase proteinQuickGO ontologyBLASTP
396748239685041023NADH-ubiquinone oxidoreductase chain H proteinQuickGO ontologyBLASTP
3968813396888977tRNA-MetQuickGO ontology
396898239691001195S ribosomal RNAQuickGO ontologyBLASTP
39692983972174287723S ribosomal RNAQuickGO ontologyBLASTP
39728393973013175tRNA-AlaQuickGO ontologyBLASTP
3972999397307577tRNA-IleQuickGO ontologyBLASTP
39732853974797151316S Ribosomal RNAQuickGO ontologyBLASTP
397554539774671923putative peptidase protein M23M37 familyQuickGO ontologyBLASTP
397752839801282601ATP-dependent Clp protease ATP-binding subunit proteinQuickGO ontologyBLASTP
39803803981108729hypothetical proteinBLASTP
39814523982312861protoporphyrinogen oxidase methyltransferase proteinQuickGO ontologyBLASTP
398230939833641056peptide chain release factor 1 proteinQuickGO ontologyBLASTP
398341739856842268enzyme I of the phosphotransferase systemQuickGO ontologyBLASTP