Pre_GI Gene

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Host: NC_010994 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010994:3666651 Rhizobium etli CIAT 652, complete genome

Host Lineage: Rhizobium etli; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It is a nitrogen-fixing symbiotic bacteria that interacts with the root of the common bean plant Phaseolus vulgaris. The molecular biology and evolution of R. etli and its relation to other nitrogen/fixing symbionts has been well studied. The genomic sequence will provide information on the process of symbiosis, on the genetic systems that allow the survival and adaptations of this bacteria to the soil, and on the evolutionary relationship and the symbiosis origin of this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
366665136679161266NADH-ubiquinone oxidoreductase protein chain FQuickGO ontologyBLASTP
366794936705312583NADH-ubiquinone oxidoreductase protein chain GQuickGO ontologyBLASTP
36706043671044441hypothetical proteinBLASTP
36710903671656567probable NADH-ubiquinone oxidoreductase proteinQuickGO ontologyBLASTP
367166736726681002NADH-ubiquinone oxidoreductase protein chain HQuickGO ontologyBLASTP
3673331367340777tRNA-MetQuickGO ontology
367350936736271195S ribosomal RNAQuickGO ontologyBLASTP
36738873676827294123S ribosomal RNAQuickGO ontologyBLASTP
3677321367739676tRNA-AlaQuickGO ontologyBLASTP
3677469367754577tRNA-IleQuickGO ontologyBLASTP
36778403679352151316S Ribosomal RNAQuickGO ontologyBLASTP
36800693680407339hypothetical proteinBLASTP
36805483680754207hypothetical proteinBLASTP
36809073681710804RNA-pseudouridine synthase protein ribosomal large subunit BQuickGO ontologyBLASTP
36817253682408684putative phosphoribosyltransferase proteinQuickGO ontologyBLASTP
368250736842491743putative transporter proteinQuickGO ontologyBLASTP
36843383685282945phosphoribosylamidoimidazolesuccinocarboxamide synthase proteinQuickGO ontologyBLASTP
36853913685993603probable transcriptional regulator protein TetR familyQuickGO ontologyBLASTP
368615136873621212probable protein secretion protein HlyD familyQuickGO ontologyBLASTP
368740836905183111probable multidrug efflux transporter proteinQuickGO ontologyBLASTP