Pre_GI Gene

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Host: NC_012587 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012587:3613162 Rhizobium sp. NGR234, complete genome

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
361316236156242463putative ATP-dependent helicase proteinQuickGO ontologyBLASTP
36156213616286666putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
361628736179931707binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
361797736192031227conserved hypothetical protein contains extracellular solute-binding domainQuickGO ontologyBLASTP
36193343620281948ornithine cyclodeaminasemu-crystallin family proteinQuickGO ontologyBLASTP
36210383622458142116S ribosomal RNAQuickGO ontologyBLASTP
3622737362281377tRNA-IleQuickGO ontology
3622879362295476tRNA-AlaQuickGO ontologyBLASTP
36235323626332280123S ribosomal RNAQuickGO ontologyBLASTP
36263063626473168hypothetical protein
362657136266901205S ribosomal RNAQuickGO ontology
3627005362708177tRNA-MetQuickGO ontology
36271263627329204hypothetical protein
362742136292531833poly-beta-hydroxybutyrate polymerase domain proteinQuickGO ontologyBLASTP
36295303630402873predicted polyketide synthesis O-methyltransferase TcmP type proteinQuickGO ontologyBLASTP
363122236329851764phage-related lysozymeQuickGO ontologyBLASTP
363304036351812142hypothetical protein
363552636367191194putative extracellular ligand-binding receptorQuickGO ontologyBLASTP
36367413637613873putative branched-chain amino acid transport system permease componentQuickGO ontologyBLASTP