Pre_GI Gene

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Host: NC_010994 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010994:57362 Rhizobium etli CIAT 652, complete genome

Host Lineage: Rhizobium etli; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It is a nitrogen-fixing symbiotic bacteria that interacts with the root of the common bean plant Phaseolus vulgaris. The molecular biology and evolution of R. etli and its relation to other nitrogen/fixing symbionts has been well studied. The genomic sequence will provide information on the process of symbiosis, on the genetic systems that allow the survival and adaptations of this bacteria to the soil, and on the evolutionary relationship and the symbiosis origin of this organism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
57362586721311two-component sensor histidine kinase proteinQuickGO ontologyBLASTP
58700611652466ATP-dependent helicase proteinQuickGO ontologyBLASTP
6116262109948ornithine cyclodeaminase proteinQuickGO ontologyBLASTP
6275764264150816S Ribosomal RNAQuickGO ontologyBLASTP
645646464077tRNA-IleQuickGO ontologyBLASTP
647136478876tRNA-AlaQuickGO ontologyBLASTP
6528268222294123S ribosomal RNAQuickGO ontologyBLASTP
68482686001195S ribosomal RNAQuickGO ontologyBLASTP
687026877877tRNA-MetQuickGO ontology
6883769217381hypothetical proteinBLASTP
71673747533081hypothetical proteinBLASTP
7521675998783probable transcriptional regulator protein LuxR familyQuickGO ontologyBLASTP
7610176457357hypothetical proteinBLASTP
76807778291023probable dTDP-glucose 46-dehydratase proteinQuickGO ontologyBLASTP
7783178814984UDP-glucose 4-epimerase proteinQuickGO ontologyBLASTP
78811806821872probable cellulose synthase proteinQuickGO ontologyBLASTP