Pre_GI: BLASTP Hits

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Query: NC_011601:2614691:2619618 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 2619618, End: 2620331, Length: 714

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012759:4132527:414282841428284143541714Escherichia coli BW2952 chromosome, complete genomeRepressor protein CI1e-126451
NC_011353:305820:305820305820306533714Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage repressor9e-126449
NC_002655:301940:301940301940302653714Escherichia coli O157:H7 EDL933, complete genomeputative cI repressor protein for prophage CP-933H9e-126449
NC_002695:301939:301939301939302652714Escherichia coli O157:H7 str. Sakai, complete genomecI9e-126449
NC_008563:1175035:118767011876701188365696Escherichia coli APEC O1, complete genomeputative CI repressor of bacteriophage1e-80299
NC_011742:1177946:119125811912581191959702Escherichia coli S88 chromosome, complete genomeRepressor protein CI from phage origin1e-80299
NC_017328:303987:317642317642318337696Shigella flexneri 2002017 chromosome, complete genomeCI protein2e-80298
NC_007946:1239278:125028212502821250935654Escherichia coli UTI89, complete genomeputative CI repressor of bacteriophage2e-80298
NC_011601:1039500:105177110517711052424654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein2e-80298
NC_013941:975353:989229989229989882654Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI protein2e-80298
NC_013364:2645438:265235726523572652980624Escherichia coli O111:H- str. 11128, complete genomeputative phage repressor protein CI3e-80297
NC_004431:1401681:141242714124271412849423Escherichia coli CFT073, complete genomeRepressor protein3e-76285
NC_020418:3133831:313802131380213138731711Morganella morganii subsp. morganii KT, complete genomerepressor protein CI4e-75280
NC_007712:2028500:206857220685722069294723Sodalis glossinidius str. 'morsitans', complete genomephage repressor6e-71267
NC_014837:2354241:235780423578042358529726Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator3e-55214
NC_012779:2184927:220196422019642202635672Edwardsiella ictaluri 93-146, complete genomerepressor protein CI5e-49194
NC_011283:4212000:422109942210994221815717Klebsiella pneumoniae 342 chromosome, complete genomephage repressor protein2e-41169
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family2e-29129
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c29e-28123
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor1e-27122
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein3e-27122
NC_004578:4499143:452278245227824523486705Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein cI5e-27121
NC_009783:1956000:195674419567441957409666Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein6e-27120
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c26e-27120
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI6e-27120
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator6e-27120
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c26e-27120
NC_009778:2993218:301640330164033017065663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-26118
NC_015663:4767443:478544147854414786193753Enterobacter aerogenes KCTC 2190 chromosome, complete genomeP22 repressor protein c26e-26117
NC_014306:3524980:356790335679033568601699Erwinia billingiae Eb661, complete genomeRepressor protein cI3e-24111
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein8e-24110
NC_012660:3116500:312771631277163128423708Pseudomonas fluorescens SBW25 chromosome, complete genomee14 prophage; putative phage repressor4e-23108
NC_004431:3040953:305923330592333059859627Escherichia coli CFT073, complete genomePutative repressor protein of prophage5e-23108
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor1e-22107
NC_017986:5509569:552387155238715524602732Pseudomonas putida ND6 chromosome, complete genometranscriptional repressor pyocin R2 PP5e-22104
NC_004578:3849835:385799038579903858721732Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein c29e-22103
NC_002947:3404000:341945034194503420181732Pseudomonas putida KT2440, complete genomepyocin R2_PP, transcriptional repressor, CI/C2 family8e-22103
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI4e-21101
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)5e-2097.8
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator2e-1892.8
NC_014910:1708045:172518017251801725950771Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein3e-1892
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage1e-1789.7
NC_010002:2110953:212346721234672124114648Delftia acidovorans SPH-1, complete genomepeptidase S24 and S26 domain protein1e-1686.7
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C22e-1685.9
NC_013446:3034486:304282630428263043365540Comamonas testosteroni CNB-2, complete genomeputative prophage repressor3e-1375.9
NC_004129:2201780:221380922138092214522714Pseudomonas fluorescens Pf-5, complete genomepeptidase S24-like domain2e-1272.4
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage4e-1271.6
NC_021066:2226826:224423422442342244866633Raoultella ornithinolytica B6, complete genomehypothetical protein9e-1270.5
NC_014640:4293430:433149743314974332201705Achromobacter xylosoxidans A8 chromosome, complete genomerepressor protein C2 domain-containing protein4e-1168.6
NC_016809:1778000:177820117782011778866666Haemophilus influenzae 10810, complete genomehypothetical protein4e-1168.6
NC_006138:2288261:230836023083602309070711Desulfotalea psychrophila LSv54, complete genomesimilar to repressor protein1e-1066.6
NC_016830:5031819:504224950422495042896648Pseudomonas fluorescens F113 chromosome, complete genomepeptidase s24-like domain protein2e-1066.2
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1065.9
NC_015424:2726223:275560227556022756036435Aeromonas veronii B565 chromosome, complete genomephage repressor3e-1065.5
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)9e-1063.9
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor1e-0963.5
NC_012791:2832001:285731328573132857981669Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-0962.4
NC_017986:4091051:410215841021584102514357Pseudomonas putida ND6 chromosome, complete genomerepressor protein CI4e-0961.6
NC_015389:905165:918044918044918676633Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, XRE family1e-0859.7
NC_011146:1998981:202611320261132026718606Geobacter bemidjiensis Bem, complete genometranscriptional repressor, LexA family3e-0858.9
NC_009524:1627414:163576016357601636419660Psychrobacter sp. PRwf-1 chromosome, complete genomeputative prophage repressor3e-0858.9
NC_011770:860944:870555870555871343789Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator5e-0858.2
NC_012918:2896671:291377829137782914383606Geobacter sp. M21 chromosome, complete genomeSOS-response transcriptional repressor, LexA7e-0857.8
NC_011750:5045927:505908250590825059756675Escherichia coli IAI39 chromosome, complete genomerepressor protein phage e14; e14 prophage2e-0756.2
NC_011742:2863316:286734128673412868015675Escherichia coli S88 chromosome, complete genomerepressor protein phage e14; e14 prophage2e-0756.2
NC_000913:1188999:120148212014821202156675Escherichia coli K12, complete genomee14 prophage; repressor protein phage e142e-0756.2
NC_008563:2946391:295003029500302950704675Escherichia coli APEC O1, complete genomeputative phage repressor2e-0756.2
NC_007946:2931364:293500329350032935677675Escherichia coli UTI89, complete genomeputative phage repressor2e-0756.2
AC_000091:1191353:120383612038361204510675Escherichia coli W3110 DNA, complete genomerepressor protein phage e142e-0756.2
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein5e-0755.1