Pre_GI: BLASTP Hits

Some Help

Query: NC_011205:1345511:1380576 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1380576, End: 1380977, Length: 402

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002695:2158314:217335721733572173752396Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein1e-40164
NC_013941:2425233:245353524535352453930396Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail component of prophage3e-40163
NC_017060:59500:830418304183445405Rahnella aquatilis HX2 plasmid PRA1, complete sequenceminor tail family protein6e-40162
NC_011745:1055354:106122410612241061619396Escherichia coli ED1a chromosome, complete genomeminor tail protein U5e-40162
NC_011750:1931384:194735619473561947751396Escherichia coli IAI39 chromosome, complete genomeminor tail protein U4e-40162
NC_004431:1352906:135720813572081357603396Escherichia coli CFT073, complete genomePutative tail component of prophage4e-40162
NC_011751:1377457:138169313816931382088396Escherichia coli UMN026 chromosome, complete genomeMinor tail protein U4e-40162
NC_011745:2025725:204099920409992041394396Escherichia coli ED1a chromosome, complete genomeminor tail protein U4e-40162
NC_013364:2522888:255012925501292550524396Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein4e-40162
NC_013941:1963523:197923119792311979626396Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-39161
NC_013361:1896446:190215919021591902554396Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein5e-38156
NC_014121:1682638:172049817204981720896399Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeminor tail protein U9e-38155
NC_011742:585908:590242590242590637396Escherichia coli S88 chromosome, complete genomeMinor tail protein U2e-37154
NC_013364:863209:869058869058869453396Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein4e-37153
NC_013941:5317424:533811453381145338509396Escherichia coli O55:H7 str. CB9615 chromosome, complete genomepermeases of the major facilitator superfamily9e-37152
NC_011740:4520373:453947745394774539890414Escherichia fergusonii ATCC 35469, complete genomeMinor tail protein U4e-37152
NC_011742:4962008:498200949820094982422414Escherichia coli S88 chromosome, complete genomeMinor tail protein U4e-37152
NC_011750:527470:546577546577546972396Escherichia coli IAI39 chromosome, complete genomeminor tail protein U1e-36151
NC_016612:3314846:334703933470393347437399Klebsiella oxytoca KCTC 1686 chromosome, complete genomeminor tail protein U7e-36149
NC_002695:2893951:290936929093692909767399Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein U4e-36149
AP010958:1472506:147585714758571476255399Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative minor tail protein4e-36149
NC_002655:2730659:275865827586582759056399Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component U of prophage CP-933U4e-36149
NC_011353:1761977:176698717669871767385399Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein U4e-36149
NC_011353:2892265:290486829048682905266399Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage minor tail protein U4e-36149
NC_013008:1761165:176596317659631766361399Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage minor tail protein U4e-36149
NC_013008:2889743:290516229051622905560399Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component U of prophage CP-933U4e-36149
NC_013353:1472506:147585714758571476255399Escherichia coli O103:H2 str. 12009, complete genomeminor tail protein4e-36149
NC_017047:1906000:192817719281771928581405Rahnella aquatilis HX2 chromosome, complete genomeminor tail family protein4e-36149
NC_013361:2169948:218506621850662185266201Escherichia coli O26:H11 str. 11368 chromosome, complete genome3e-1890.1
NC_013364:3312379:333003733300373330198162Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein1e-1065.1