Pre_GI: BLASTP Hits

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Query: NC_011205:1345511:1380013 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1380013, End: 1380579, Length: 567

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017060:59500:834428344283996555Rahnella aquatilis HX2 plasmid PRA1, complete sequenceprophage minor tail Z family protein2e-1789
NC_017047:1906000:192762619276261928180555Rahnella aquatilis HX2 chromosome, complete genomeprophage minor tail Z family protein2e-1789
NC_011742:4962008:498144649814464982024579Escherichia coli S88 chromosome, complete genomeMinor tail protein Z (GPZ) of prophage3e-1581.3
NC_008563:5011997:503143650314365032014579Escherichia coli APEC O1, complete genomeputative tail component of prophage CP-933K3e-1581.3
NC_011740:4520373:453891445389144539492579Escherichia fergusonii ATCC 35469, complete genomeMinor tail protein Z (GPZ) of prophage8e-1580.1
NC_014121:1682638:171994717199471720501555Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completegp113e-1477.8
NC_016612:3314846:334649133464913347042552Klebsiella oxytoca KCTC 1686 chromosome, complete genomeprophage minor tail Z family protein4e-1374.3
NC_013941:1963523:197962319796231980156534Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-1373.2
NC_013364:2522888:255052125505212551054534Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein5e-1270.9
NC_011750:1931384:194774819477481948281534Escherichia coli IAI39 chromosome, complete genomeminor tail protein Z (GpZ)6e-1270.5
NC_011745:1055354:106069410606941061227534Escherichia coli ED1a chromosome, complete genomeminor tail protein Z (GpZ)8e-1270.1
NC_013941:2425233:245392724539272454460534Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage minor tail protein Z1e-1169.7
NC_011751:1377457:138116313811631381696534Escherichia coli UMN026 chromosome, complete genomeMinor tail protein Z (GpZ)7e-1167
NC_004431:1352906:135667813566781357211534Escherichia coli CFT073, complete genomePutative tail component of prophage2e-1065.1
NC_013361:2169948:218545721854572185990534Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein3e-1064.7
NC_002695:2158314:217374921737492174282534Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein3e-1064.7
NC_011750:527470:546002546002546580579Escherichia coli IAI39 chromosome, complete genomeminor tail protein Z (GpZ)5e-0960.8
NC_013364:863209:868486868486869061576Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein5e-0960.8
NC_013361:1896446:190158419015841902162579Escherichia coli O26:H11 str. 11368 chromosome, complete genomeminor tail protein1e-0859.7
NC_011742:585908:589601589601590245645Escherichia coli S88 chromosome, complete genomeMinor tail protein Z (GpZ)1e-0859.7
NC_011745:2025725:204139120413912041966576Escherichia coli ED1a chromosome, complete genomeminor tail protein Z (GpZ)1e-0859.3
NC_013941:5317424:533753953375395338117579Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage minor tail protein Z1e-0859.3
AP010958:1472506:147521514752151475844630Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative minor tail protein5e-0754.3
NC_002655:2730659:275906927590692759698630Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component Z of prophage CP-933U5e-0754.3
NC_013008:2889743:290557329055732906202630Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber component Z of prophage CP-933U5e-0754.3
NC_013353:1472506:147521514752151475844630Escherichia coli O103:H2 str. 12009, complete genomeminor tail protein5e-0754.3
NC_016613:2160356:216759621675962168231636Vibrio sp. EJY3 chromosome 1, complete sequenceprophage minor tail Z family protein5e-0754.3
NC_011353:2892265:290527929052792905902624Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage minor tail protein Z5e-0753.9
NC_002695:2893951:290978029097802910403624Escherichia coli O157:H7 str. Sakai, complete genomeputative minor tail protein5e-0753.9
NC_013008:1761165:176532717653271765950624Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeprophage minor tail protein Z6e-0753.9
NC_011353:1761977:176635117663511766974624Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage minor tail protein Z6e-0753.9
NC_013364:3339768:334392433439243344553630Escherichia coli O111:H- str. 11128, complete genomeputative minor tail protein1e-0653.1