Pre_GI: BLASTP Hits

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Query: NC_009792:4658909:4679778 Citrobacter koseri ATCC BAA-895, complete genome

Start: 4679778, End: 4680374, Length: 597

Host Lineage: Citrobacter koseri; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter koseri ATCC BAA-895 is a clinical isolate from a human infant. Causative agent of neonatal meningitis. Citrobacter koseri, previously known as Citrobacter diversus, Levinea diversus or Levinea malonatica resides in a wide range of environments, including soil, water and food products. It is an occasional inhabitant of human and animal intestines, but is mainly characterized as being a causative agent of neonatal meningitis with an extreme high rate of multiple brain abscess initiations and a concomitant high moratility rate. The bacteria are used in neonatal rat models to study the mechanism of blood-brain barrier penetration, host immune response evasion and its resistance to phagocytotic killing.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:3611993:363512536351253635721597Salmonella bongori NCTC 12419, complete genomeTetR family transcriptional regulator2e-110397
NC_011742:3998285:402054540205454021141597Escherichia coli S88 chromosome, complete genomenucleoid occlusion protein1e-103375
NC_010498:4031500:405251540525154053111597Escherichia coli SMS-3-5, complete genometranscriptional regulator domain-containing protein1e-103375
NC_011750:4307166:432941443294144330010597Escherichia coli IAI39 chromosome, complete genomenucleoid occlusion protein1e-103375
NC_011740:4007000:403120540312054031801597Escherichia fergusonii ATCC 35469, complete genomedivision inhibitor2e-103374
NC_008253:3896704:391896439189643919560597Escherichia coli 536, complete genomeputative TetR-family transcriptional regulator2e-103374
NC_008563:4083558:410577641057764106414639Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-103374
NC_007946:4050762:407298040729804073618639Escherichia coli UTI89, complete genomeputative transcriptional regulator2e-103374
NC_011601:4036590:406086440608644061460597Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomenucleoid occlusion protein2e-103374
NC_011745:4226186:424865842486584249254597Escherichia coli ED1a chromosome, complete genomenucleoid occlusion protein2e-103374
NC_011751:4251296:427377242737724274368597Escherichia coli UMN026 chromosome, complete genomenucleoid occlusion protein3e-103373
CU928160:3862935:388517738851773885773597Escherichia coli IAI1 chromosome, complete genomedivision inhibitor3e-103373
NC_009801:4108179:413043041304304131026597Escherichia coli E24377A, complete genometranscriptional regulator domain protein, TetR family3e-103373
NC_011748:4167043:418951641895164190112597Escherichia coli 55989, complete genomenucleoid occlusion protein3e-103373
NC_000913:3786124:381251738125173813113597Escherichia coli K12, complete genomenucleoid occlusion protein3e-103373
NC_009800:3821824:384407538440753844671597Escherichia coli HS, complete genometranscriptional regulator domain protein, TetR family3e-103373
NC_002695:4537000:455835345583534558949597Escherichia coli O157:H7 str. Sakai, complete genomenucleoid occlusion protein3e-103373
NC_010658:3774110:379731637973163797912597Shigella boydii CDC 3083-94, complete genometranscriptional regulator domain protein, TetR family3e-103373
NC_004431:4223232:424545042454504246088639Escherichia coli CFT073, complete genomenucleoid occlusion protein4e-103373
CP002185:3998112:402036340203634020959597Escherichia coli W, complete genomedivision inhibitor3e-103373
CU928145:4167043:418951641895164190112597Escherichia coli 55989 chromosome, complete genomedivision inhibitor3e-103373
NC_010473:3883701:391009439100943910690597Escherichia coli str. K-12 substr. DH10B, complete genomedivision inhibitor3e-103373
NC_017328:3794105:381700838170083817604597Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator3e-103373
NC_013941:4427000:444829844482984448894597Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHTH-type protein slmA3e-103373
NC_013364:4460500:448189544818954482491597Escherichia coli O111:H- str. 11128, complete genomedivision inhibitor Ttk3e-103373
NC_013008:4595043:461749846174984618094597Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenucleoid occlusion protein3e-103373
NC_012967:3729813:375284937528493753445597Escherichia coli B str. REL606 chromosome, complete genomenucleoid occlusion protein3e-103373
NC_012759:3675396:370084337008433701439597Escherichia coli BW2952 chromosome, complete genomenucleoid occlusion protein3e-103373
NC_011741:3862935:388517738851773885773597Escherichia coli IAI1 chromosome, complete genomenucleoid occlusion protein3e-103373
NC_011415:4040211:406268440626844063280597Escherichia coli SE11 chromosome, complete genomenucleoid occlusion protein3e-103373
NC_011353:4639002:466145746614574662053597Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoid occlusion protein3e-103373
NC_006511:3690828:371394437139443714540597Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCnucleoid occlusion protein1e-102372
NC_011147:3686500:370961437096143710210597Salmonella enterica subsp. enterica serovar Paratyphi A strnucleoid occlusion protein1e-102372
NC_007613:3637832:366005036600503660688639Shigella boydii Sb227, complete genomeputative transcriptional regulator7e-103372
NC_004337:3761865:378476637847663785404639Shigella flexneri 2a str. 301, complete genomenucleoid occlusion protein7e-103372
NC_007606:3784847:380672138067213807359639Shigella dysenteriae Sd197, complete genomeputative transcriptional regulator7e-103372
NC_004337:3590323:378476637847663785404639Shigella flexneri 2a str. 301, complete genomenucleoid occlusion protein7e-103372
NC_016845:5162481:516554751655475166143597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,nucleoid occlusion protein2e-102371
NC_012731:5074000:507666750766675077263597Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomenucleoid occlusion protein2e-102371
NC_009648:4359875:436248843624884363084597Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomenucleoid occlusion protein2e-102371
NC_011094:3778000:380137138013713801967597Salmonella enterica subsp. enterica serovar Schwarzengrund strnucleoid occlusion protein3e-102370
NC_011083:3915500:393829539382953938891597Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator domain protein, TetR family3e-102370
NC_006905:3845000:386758538675853868181597Salmonella enterica subsp. enterica serovar Choleraesuis strnucleoid occlusion protein3e-102370
NC_011149:3822000:384465238446523845248597Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator domain protein, TetR family3e-102370
NC_010102:3851500:387423238742323874828597Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-102370
NC_003197:3902500:392528539252853925881597Salmonella typhimurium LT2, complete genomenucleoid occlusion protein3e-102370
NC_011080:3875320:389843638984363899032597Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator domain protein, TetR family3e-102370
NC_011205:3942500:396498639649863965582597Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853nucleoid occlusion protein3e-102370
NC_011294:3782655:380638938063893806985597Salmonella enterica subsp. enterica serovar Enteritidis strnucleoid occlusion protein3e-102370
NC_012125:3840000:386243838624383863034597Salmonella enterica subsp. enterica serovar Paratyphi C strainnucleoid occlusion protein3e-102370
NC_016810:3923988:394659939465993947195597Salmonella enterica subsp. enterica serovar Typhimurium strputative TetR family transcriptional regulator3e-102370
NC_016856:3916500:393897739389773939573597Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Snucleoid occlusion protein3e-102370
NC_016857:3924000:394660039466003947196597Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74nucleoid occlusion protein3e-102370
NC_016860:3925500:394818139481813948777597Salmonella enterica subsp. enterica serovar Typhimurium strnucleoid occlusion protein3e-102370
NC_016863:3864000:388658438865843887180597Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1nucleoid occlusion protein3e-102370
NC_017046:3923000:394542639454263946022597Salmonella enterica subsp. enterica serovar Typhimurium str. 798TetR-family transcriptional regulator3e-102370
NC_002655:4606000:462729446272944627932639Escherichia coli O157:H7 EDL933, complete genomenucleoid occlusion protein3e-102370
NC_013850:109500:124626124626125222597Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family2e-101367
NC_011283:105245:119430119430120026597Klebsiella pneumoniae 342 chromosome, complete genomenucleoid occlusion protein2e-101367
NC_010694:63654:826768267683272597Erwinia tasmaniensis, complete genomePutative transcriptional regulator3e-97353
NC_013971:73037:100096100096100692597Erwinia amylovora ATCC 49946 chromosome, complete genomeTetR family transcriptional regulator5e-97353
NC_013961:73037:100096100096100692597Erwinia amylovora, complete genomeHTH-type protein slmA5e-97353
NC_016816:127802:143853143853144449597Pantoea ananatis LMG 5342, complete genomeHTH-type protein SlmA3e-92337
NC_004547:164000:164389164389164985597Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenucleoid occlusion protein1e-89328
NC_013421:4790696:481487048148704815466597Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, TetR family1e-89328
NC_013456:212150:213521213521214111591Vibrio sp. Ex25 chromosome 1, complete genometranscriptional regulator2e-72271
NC_016602:173314:174653174653175243591Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceTetR family transcriptional regulator1e-71268
NC_008700:367949:392054392054392647594Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, TetR family3e-59228
NC_003910:187630:191621191621192217597Colwellia psychrerythraea 34H, complete genomenucleoid occlusion protein5e-57220
NC_016513:689689:705146705146705745600Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completenucleoid occlusion protein3e-50197
NC_013416:386301:401757401757402356600Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscriptional regulator, TetR family3e-50197
NC_012913:2189862:219078621907862191385600Aggregatibacter aphrophilus NJ8700, complete genometranscriptional regulator, TetR family4e-50197
NC_013446:4723380:472676747267674727462696Comamonas testosteroni CNB-2, complete genometranscriptional regulator, TetR family2e-39161
NC_011979:773673:796097796097796687591Geobacter sp. FRC-32, complete genometranscriptional regulator, TetR family4e-0961.2
NC_014365:2004332:201289820128982013506609Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional regulator, TetR family7e-0857.4
NC_010814:190673:205816205816206403588Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family3e-0755.1
NC_010002:2933909:295690429569042957512609Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family4e-0754.7
NC_008609:1976403:207035320703532070961609Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, TetR family6e-0753.9
NC_013385:1882549:191438119143811914974594Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family1e-0653.1
NC_002939:1021297:102380710238071024397591Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family1e-0652.8
NC_016112:364723:383161383161383769609Methylomicrobium alcaliphilum chromosome, complete genomeTetR family transcriptional regulator2e-0652
NC_007298:1759881:179978717997871800392606Dechloromonas aromatica RCB, complete genomeregulatory protein, TetR4e-0651.6
NC_010814:155834:180041180041180643603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family4e-0651.2
NC_008609:142471:153767153767154375609Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, TetR family4e-0651.2