Pre_GI: BLASTP Hits

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Query: NC_009708:1284555:1293092 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1293092, End: 1293454, Length: 363

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:1273000:128147112814711281851381Yersinia pseudotuberculosis YPIII, complete genomeCrcB protein1e-51201
NC_010634:3368000:337848233784823378862381Yersinia pseudotuberculosis PB1/+, complete genomeCrcB protein1e-51201
NC_006155:3456488:346482534648253465205381Yersinia pseudotuberculosis IP 32953, complete genomecamphor resistance protein CrcB1e-51201
NC_017154:2999841:300819630081963008558363Yersinia pestis D106004 chromosome, complete genomemembrane protein6e-51199
NC_017160:2976683:298284929828492983211363Yersinia pestis D182038 chromosome, complete genomemembrane protein6e-51199
NC_008149:1317109:132747813274781327858381Yersinia pestis Nepal516, complete genomemembrane protein4e-51199
NC_003143:2992295:300266430026643003044381Yersinia pestis CO92, complete genomecamphor resistance protein CrcB4e-51199
NC_010159:3779129:378746437874643787844381Yersinia pestis Angola, complete genomecrcB homolog4e-51199
NC_004088:1387276:139757913975791397959381Yersinia pestis KIM, complete genomecamphor resistance protein CrcB4e-51199
NC_008150:2681327:269169626916962692076381Yersinia pestis Antiqua, complete genomehypothetical protein4e-51199
NC_005810:2739878:275024227502422750622381Yersinia pestis biovar Microtus str. 91001, complete genomecamphor resistance protein CrcB4e-51199
NC_009381:1783886:179339517933951793775381Yersinia pestis Pestoides F chromosome, complete genomemembrane protein4e-51199
NC_017168:2751027:275936427593642759744381Yersinia pestis A1122 chromosome, complete genomecamphor resistance protein CrcB4e-51199
NC_017265:3063016:307135330713533071733381Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-51199
NC_014029:3047506:305787530578753058237363Yersinia pestis Z176003 chromosome, complete genomemembrane protein6e-51199
NC_015224:3587500:361729936172993617679381Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-43174
NC_013921:36000:430634306343464402Thermoanaerobacter italicus Ab9 chromosome, complete genomeCrcB protein4e-1270.1
NC_014209:81643:101443101443101844402Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CrcB protein8e-1268.9
NC_010321:2256758:227049122704912270895405Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeCrcB protein5e-1166.2
NC_010320:33814:406454064541049405Thermoanaerobacter sp. X514 chromosome, complete genomeCrcB protein5e-1166.2
NC_014538:33718:405494054940953405Thermoanaerobacter sp. X513 chromosome, complete genomeCrcB protein5e-1166.2
NC_014964:2237979:225763522576352258039405Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeCrcB protein5e-1166.2
NC_010125:3854957:385792238579223858344423Gluconacetobacter diazotrophicus PAl 5, complete genomeputative chromosome condensation protein8e-1062.4
NC_021182:2059143:207701220770122077371360Clostridium pasteurianum BC1, complete genomecrcB protein2e-0961.2
NC_015958:57957:626596265963060402Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeCrcB-like protein2e-0961.2
NC_014364:3707311:373119937311993731558360Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCrcB protein3e-0960.5
NC_015555:49842:568935689357294402Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCrcB-like protein9e-0958.9
NC_019970:35985:437844378444185402Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecrcB protein2e-0857.4
NC_014410:51711:582345823458635402Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CrcB protein4e-0857
NC_014935:711765:732375732375732758384Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecamphor resistance protein crcb6e-0856.2
NC_016027:1357659:136201313620131362429417Gluconacetobacter xylinus NBRC 3288, complete genomeintegral membrane protein1e-0755.1
NC_015577:786155:788233788233788610378Treponema azotonutricium ZAS-9 chromosome, complete genomeCrcB protein2e-0754.7
NC_006155:3456488:346522134652213465625405Yersinia pseudotuberculosis IP 32953, complete genomecamphor resistance protein CrcB2e-0754.3
NC_010159:3779129:378704437870443787448405Yersinia pestis Angola, complete genomecrcB homolog2e-0754.3
NC_010465:1273000:128105112810511281455405Yersinia pseudotuberculosis YPIII, complete genomeCamphor resistance CrcB protein2e-0754.3
NC_010634:3368000:337887833788783379282405Yersinia pseudotuberculosis PB1/+, complete genomecamphor resistance CrcB protein2e-0754.3
NC_003143:2992295:300224430022443002648405Yersinia pestis CO92, complete genomecamphor resistance protein CrcB2e-0754.3
NC_008150:2681327:269127626912762691680405Yersinia pestis Antiqua, complete genomehypothetical protein2e-0754.3
NC_005810:2739878:274982227498222750226405Yersinia pestis biovar Microtus str. 91001, complete genomecamphor resistance protein CrcB2e-0754.3
NC_004088:1387276:139715913971591397569411Yersinia pestis KIM, complete genomecamphor resistance protein CrcB2e-0754.3
NC_008149:1317109:132705813270581327462405Yersinia pestis Nepal516, complete genomemembrane protein2e-0754.3
NC_008800:3279468:328209532820953282478384Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,camphor resistance protein CrcB2e-0754.3
NC_015224:1440283:145549814554981455881384Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-0754.3
NC_017265:3063016:307174930717493072153405Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-0754.3
NC_017168:2751027:275976027597602760164405Yersinia pestis A1122 chromosome, complete genomecamphor resistance protein CrcB2e-0754.3
NC_017160:2976683:298242929824292982833405Yersinia pestis D182038 chromosome, complete genomecamphor resistance protein CrcB2e-0754.3
NC_017154:2999841:300857430085743008978405Yersinia pestis D106004 chromosome, complete genomecamphor resistance protein CrcB2e-0754.3
NC_014029:3047506:305745530574553057859405Yersinia pestis Z176003 chromosome, complete genomecamphor resistance protein CrcB2e-0754.3
NC_009708:1284555:129267212926721293076405Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecamphor resistance protein CrcB2e-0754.3
NC_009381:1783886:179379117937911794195405Yersinia pestis Pestoides F chromosome, complete genomecamphor resistance protein CrcB2e-0754.3
NC_006087:28490:675526755267965414Leifsonia xyli subsp. xyli str. CTCB07, complete genomeintegral membrane protein3e-0753.9
NC_003143:2895617:291768629176862918069384Yersinia pestis CO92, complete genomecamphor resistance protein CrcB4e-0753.5
NC_008150:2785830:279282927928292793212384Yersinia pestis Antiqua, complete genomehypothetical protein4e-0753.5
NC_004088:1291754:131381813138181314207390Yersinia pestis KIM, complete genomecamphor resistance protein CrcB4e-0753.5
NC_014217:1352777:135571013557101356111402Starkeya novella DSM 506 chromosome, complete genomeCrcB protein5e-0753.1
NC_010002:3887926:390905339090533909439387Delftia acidovorans SPH-1, complete genomeCrcB protein2e-0651.2
NC_014166:401815:403684403684404070387Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecamphor resistance CrcB protein2e-0651.2
NC_014814:3926676:394232239423223942690369Mycobacterium sp. Spyr1 chromosome, complete genomecamphor resistance protein CrcB2e-0651.2
NC_015672:2102580:211539621153962115776381Flexistipes sinusarabici DSM 4947 chromosome, complete genomeCrcB-like protein7e-0649.3
NC_014758:1387470:140549514054951405863369Calditerrivibrio nitroreducens DSM 19672 chromosome, completecamphor resistance protein crcb7e-0649.3
NC_014638:148527:164935164935165303369Bifidobacterium bifidum PRL2010 chromosome, complete genomefamily protein CrcB9e-0648.9