Pre_GI: BLASTP Hits

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Query: NC_009664:4347718:4349218 Kineococcus radiotolerans SRS30216, complete genome

Start: 4349218, End: 4350579, Length: 1362

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4423829:4461207446120744623971191Kineococcus radiotolerans SRS30216, complete genomeintegral membrane sensor signal transduction histidine kinase1e-26121
NC_015957:8569721:8590806859080685921791374Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative signal transduction histidine kinase1e-21104
NC_013521:2193203:2196804219680421980241221Sanguibacter keddieii DSM 10542, complete genomesignal transduction histidine kinase3e-21103
NC_009921:3854969:3885817388581738870341218Frankia sp. EAN1pec, complete genomeintegral membrane sensor signal transduction histidine kinase6e-21102
NC_009921:3999040:4016718401671840180551338Frankia sp. EAN1pec, complete genomeintegral membrane sensor signal transduction histidine kinase3e-20100
NC_019673:1988853:2012554201255420136751122Saccharothrix espanaensis DSM 44229 complete genomeputative histidine kinase1e-1998.2
NC_015953:2059083:2077758207775820791791422Streptomyces sp. SirexAA-E chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase3e-1996.7
NC_003888:4031299:4032042403204240333671326Streptomyces coelicolor A3(2), complete genometwo-component system sensor kinase4e-1996.3
NC_009921:8648994:8669977866997786714671491Frankia sp. EAN1pec, complete genomeintegral membrane sensor signal transduction histidine kinase8e-1995.5
NC_017955:2494640:2513712251371225148511140Modestobacter marinus, complete genometwo component integral membrane sensor signal transduction histidine kinase4e-1789.7
NC_003888:7866148:7876048787604878772411194Streptomyces coelicolor A3(2), complete genomeprobable two-component system sensor kinase4e-1789.7
NC_015514:3911655:3936688393668839379621275Cellulomonas fimi ATCC 484 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase4e-1686.7
NC_013595:5176000:5197494519749451986931200Streptosporangium roseum DSM 43021, complete genomeSignal transduction histidine kinase-like protein4e-1686.3
NC_021177:2185898:2204422220442222057951374Streptomyces fulvissimus DSM 40593, complete genomeIntegral membrane sensor signal transduction histidine kinase6e-1685.9
NC_013929:1119384:1127261112726111284631203Streptomyces scabiei 87.22 chromosome, complete genometwo-component system sensor kinase7e-1685.5
NC_013131:8029621:8051812805181280530111200Catenulispora acidiphila DSM 44928, complete genomehistidine kinase1e-1585.1
NC_009953:1831000:1831031183103118323081278Salinispora arenicola CNS-205 chromosome, complete genomehistidine kinase9e-1685.1
NC_013169:1759900:1776071177607117774201350Kytococcus sedentarius DSM 20547, complete genomesignal transduction histidine kinase9e-1685.1
NC_010162:7620000:7628585762858576297421158Sorangium cellulosum 'So ce 56', complete genomeputative two-component system sensor kinase2e-1584.3
NC_008699:1067855:1070611107061110717891179Nocardioides sp. JS614, complete genomehistidine kinase, dimerisation and phosphoacceptor region2e-1584
NC_013947:656140:6795396795396806811143Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehistidine kinase3e-1583.6
NC_009921:4399000:4412349441234944136831335Frankia sp. EAN1pec, complete genomeintegral membrane sensor signal transduction histidine kinase4e-1583.2
NC_016111:2257166:2259667225966722609771311Streptomyces cattleya NRRL 8057, complete genometwo-component system sensor kinase4e-1582.8
NC_016801:394400:4055124055124067381227Corynebacterium diphtheriae C7 (beta) chromosome, complete genometwo-component system sensor histidine kinase8e-1582
NC_018750:5399316:5414659541465954158551197Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase3e-1480.1
NC_016582:6811273:6815992681599268171731182Streptomyces bingchenggensis BCW-1 chromosome, complete genomehistidine kinase5e-1479.3
NC_013169:612456:6148136148136161291317Kytococcus sedentarius DSM 20547, complete genomehistidine kinase8e-1478.6
NC_003888:4523500:4536527453652745378971371Streptomyces coelicolor A3(2), complete genometwo-component sensor kinase8e-1478.6
NC_016582:6811273:6826277682627768277011425Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative two-component system sensor kinase1e-1378.2
NC_013757:2046000:2057159205715920583281170Geodermatophilus obscurus DSM 43160, complete genomehistidine kinase dimerization and phosphoacceptor region3e-1377
NC_013595:196493:1988221988222000961275Streptosporangium roseum DSM 43021, complete genomeSignal transduction histidine kinase-like protein4e-1376.6
NC_008148:1567703:1570582157058215718051224Rubrobacter xylanophilus DSM 9941, complete genomeperiplasmic sensor signal transduction histidine kinase5e-1376.3
NC_010572:4585500:4598066459806645993851320Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative two-component system sensor kinase6e-1375.9
NC_021177:5697210:5720678572067857218771200Streptomyces fulvissimus DSM 40593, complete genomeSensor-histidine kinase6e-1375.9
NC_017955:3731480:3744254374425437455401287Modestobacter marinus, complete genometwo-component integral membrane sensor signal transduction histidine kinase2e-1274.3
NC_018868:1271742:1274986127498612762121227Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehistidine kinase2e-1274.3
NC_017317:51428:5721457214582241011Corynebacterium ulcerans 809 chromosome, complete genomeoxygen sensor histidine kinase2e-1273.9
NC_013947:1956923:1976270197627019774211152Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehistidine kinase3e-1273.6
NC_014550:1581812:1616675161667516179071233Arthrobacter arilaitensis Re117, complete genomeputative signal transduction histidine kinase4e-1272.8
NC_016582:5987039:5993878599387859950801203Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative two-component system sensor kinase5e-1272.8
NC_013595:606096:6196566196566207741119Streptosporangium roseum DSM 43021, complete genomeputative two-component system sensor kinase7e-1272.4
NC_013929:1584906:1603147160314716041541008Streptomyces scabiei 87.22 chromosome, complete genometwo component sensor kinase7e-1272.4
NC_016114:4333390:4341936434193643432521317Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehistidine kinase dimerization and phosphoacceptor region6e-1272.4
NC_008596:2873675:2875590287559028767471158Mycobacterium smegmatis str. MC2 155, complete genomesensor kinase1e-1171.6
NC_013169:2423863:2453428245342824546421215Kytococcus sedentarius DSM 20547, complete genomesignal transduction histidine kinase1e-1171.6
NC_011886:4336417:4361861436186143632371377Arthrobacter chlorophenolicus A6, complete genomehistidine kinase2e-1171.2
NC_013595:3541012:3541674354167435427921119Streptosporangium roseum DSM 43021, complete genomeputative two-component system sensor kinase2e-1170.9
NC_014210:5752651:5758783575878357599311149Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integral membrane sensor signal transduction histidine kinase2e-1170.9
NC_013739:717352:7210357210357221741140Conexibacter woesei DSM 14684, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1170.9
NC_018750:6237875:6251329625132962524501122Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase3e-1170.1
NC_012669:96966:1108371108371120181182Beutenbergia cavernae DSM 12333, complete genomehistidine kinase1e-1068.6
NC_014210:2372813:2394666239466623958471182Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integral membrane sensor signal transduction histidine kinase1e-1068.6
NC_016109:3591401:3591401359140135925191119Kitasatospora setae KM-6054, complete genomeputative two-component system sensor kinase1e-1068.2
NC_009380:4729340:4748874474887447500971224Salinispora tropica CNB-440 chromosome, complete genomehistidine kinase, dimerisation and phosphoacceptor region2e-1067.8
NC_016109:5543112:5559633555963355608381206Kitasatospora setae KM-6054, complete genomeputative two-component system sensor kinase2e-1067.4
NC_015957:5310000:5318013531801353192151203Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative signal transduction histidine kinase2e-1067
NC_014210:2597000:2616442261644226179321491Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integral membrane sensor signal transduction histidine kinase3e-1067
NC_006270:4149004:4149004414900441501461143Bacillus licheniformis ATCC 14580, complete genomeHypothetical ATP-binding region, ATPase-like5e-1066.2
NC_014650:2417509:2432451243245124335571107Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase8e-1065.5
NC_013729:4835452:4840812484081248419781167Kribbella flavida DSM 17836, complete genomehistidine kinase7e-1065.5
NC_018750:3741581:3758691375869137598181128Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase1e-0964.7
NC_013929:6008072:6016109601610960174521344Streptomyces scabiei 87.22 chromosome, complete genometwo-component system sensor kinase2e-0964.3
NC_014960:1697818:1729807172980717309401134Anaerolinea thermophila UNI-1, complete genometwo-component sensor histidine kinase2e-0964.3
NC_015953:4746983:4769152476915247703781227Streptomyces sp. SirexAA-E chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0964.3
NC_013235:593289:6067186067186078661149Nakamurella multipartita DSM 44233, complete genomehistidine kinase2e-0963.9
NC_009328:448224:4936944936944947191026Geobacillus thermodenitrificans NG80-2 chromosome, complete genometwo-component sensor histidine kinase3e-0963.5
NC_010571:2041277:2067947206794720691041158Opitutus terrae PB90-1, complete genomeintegral membrane sensor signal transduction histidine kinase3e-0963.5
NC_016113:11500:3003030030312051176Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencesensor kinase7e-0962.4
NC_010086:20876:4489744897462761380Burkholderia multivorans ATCC 17616 chromosome 2, completeintegral membrane sensor signal transduction histidine kinase7e-0962.4
NC_018524:4988810:5020000502000050210461047Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein9e-0962
NC_016943:1314500:1329748132974813308811134Blastococcus saxobsidens DD2, complete genomeTwo component signal transduction histidine kinase1e-0861.6
NC_006322:4149500:414955741495574150261705Bacillus licheniformis ATCC 14580, complete genomeYvfT1e-0861.6
NC_007644:3229:2327023270247331464Moorella thermoacetica ATCC 39073, complete genomeperiplasmic sensor signal transduction histidine kinase1e-0861.2
NC_014209:1487699:1504499150449915056651167Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,DegS sensor signal transduction histidine kinase2e-0861.2
NC_018524:4848154:4871272487127248725011230Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehistidine kinase family protein2e-0860.5
NC_013947:656140:6593696593696605801212Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehistidine kinase3e-0860.1
NC_019771:1356000:1365602136560213715925991Anabaena cylindrica PCC 7122, complete genomemulti-sensor signal transduction multi-kinase2e-0757.4
NC_020054:6111419:6148038614803861499691932Fibrella aestuarina BUZ 2 drat genometwo-component system, NarL family, sensor kinase2e-0757.4
NC_013093:2633000:2668343266834326693741032Actinosynnema mirum DSM 43827, complete genomehistidine kinase4e-0756.6
NC_015732:140087:1446471446471459841338Spirochaeta caldaria DSM 7334 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase5e-0756.2
NC_014391:3445672:3461080346108034622341155Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehistidine kinase dimerization and phosphoacceptor region5e-0756.2
NC_013595:1851226:1862814186281418639681155Streptosporangium roseum DSM 43021, complete genomeHistidine kinase5e-0756.2
NC_006177:520055:5342435342435361441902Symbiobacterium thermophilum IAM 14863, complete genometwo-component sensor histidine kinase4e-0756.2
NC_019940:389979:4080324080324096451614Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain-containing protein4e-0756.2
NC_010407:2406113:2421488242148824229241437Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative two-component system sensor kinase6e-0755.8
NC_008752:4665699:4686650468665046880861437Acidovorax avenae subsp. citrulli AAC00-1, complete genomeintegral membrane sensor signal transduction histidine kinase8e-0755.5
NC_013757:3613438:3613438361343836152581821Geodermatophilus obscurus DSM 43160, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0654.7
NC_015312:6717973:671860867186086719492885Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehistidine kinase2e-0654.3
NC_013169:87269:1024511024511035691119Kytococcus sedentarius DSM 20547, complete genomesignal transduction histidine kinase3e-0653.9
NC_015953:6212366:6240356624035662415821227Streptomyces sp. SirexAA-E chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0653.9
NC_015957:6859259:6869496686949668707371242Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative signal transduction histidine kinase4e-0653.1
NC_017218:1166844:1186511118651111889672457Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehistidine kinase5e-0652.8
NC_011662:535613:5367005367005380941395Thauera sp. MZ1T, complete genomemulti-sensor signal transduction histidine kinase5e-0652.8
NC_007005:2191500:2214084221408422152681185Pseudomonas syringae pv. syringae B728a, complete genomeATP-binding region, ATPase-like:Histidine kinase6e-0652.4
NC_009767:5464796:5465677546567754677252049Roseiflexus castenholzii DSM 13941, complete genomeintegral membrane sensor signal transduction histidine kinase9e-0652