Pre_GI Gene

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Host: NC_010407 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010407:2406113 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
240884524107431899hypothetical proteinBLASTP
24108992411483585hypothetical proteinBLASTP
24115512412372822hypothetical proteinBLASTP
24124882413471984hypothetical proteinBLASTP
24150482415590543putative adenine phosphoribosyltransferaseQuickGO ontologyBLASTP
24155872416279693putative sugar-phosphate epimeraseQuickGO ontologyBLASTP
24162762417259984putative sugar-phosphate pyrophosphokinaseQuickGO ontologyBLASTP
24172562417888633hypothetical proteinBLASTP
24197362420119384putative chorismate mutaseQuickGO ontologyBLASTP
24202022420621420putative stress induced proteinQuickGO ontologyBLASTP
24207932421491699putative two component system response regulatorQuickGO ontologyBLASTP
242148824229241437putative two-component system sensor kinaseQuickGO ontologyBLASTP
242296624249992034putative beta-lactamaseQuickGO ontologyBLASTP