Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1456236 Kineococcus radiotolerans SRS30216, complete genome

Start: 1456236, End: 1457255, Length: 1020

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020291:2701149:2715735271573527168381104Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative agmatine deiminase AguA2e-49196
NC_012560:4929683:4949681494968149507991119Azotobacter vinelandii DJ, complete genomePorphyromonas-type peptidyl-arginine deiminase2e-47190
NC_021150:4929670:4949668494966849507861119Azotobacter vinelandii CA6, complete genomeagmatine deiminase2e-47190
NC_014829:4565467:4579521457952145805401020Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeAgmatine deiminase1e-46187
NC_015563:4093650:4114102411410241152591158Delftia sp. Cs1-4 chromosome, complete genomeAgmatine deiminase6e-46184
NC_010501:5442000:5459657545965754607631107Pseudomonas putida W619, complete genomeagmatine deiminase1e-44180
NC_010572:1293786:1296025129602512971791155Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative peptidyl-arginine deiminase family protein1e-42174
NC_013421:163114:1811791811791822821104Pectobacterium wasabiae WPP163, complete genomeagmatine deiminase1e-41170
NC_005773:176885:1811051811051822111107Pseudomonas syringae pv. phaseolicola 1448A, complete genomepeptidyl-arginine deiminase-like protein3e-40166
NC_020209:5077410:5078827507882750799331107Pseudomonas poae RE*1-1-14, complete genomeagmatine deiminase3e-40165
NC_017265:854492:8778498778498789641116Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Agmatine deiminase6e-40164
NC_017168:50391:7383573835749501116Yersinia pestis A1122 chromosome, complete genomeagmatine deiminase6e-40164
NC_017160:945176:9685389685389696531116Yersinia pestis D182038 chromosome, complete genomehypothetical protein6e-40164
NC_017154:941065:9665639665639676781116Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-40164
NC_014029:1001000:1024418102441810255331116Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-40164
NC_009381:627685:6510416510416521561116Yersinia pestis Pestoides F chromosome, complete genomeagmatine deiminase6e-40164
NC_005810:3964468:3989148398914839902631116Yersinia pestis biovar Microtus str. 91001, complete genomeagmatine deiminase6e-40164
NC_008150:361224:3867033867033878181116Yersinia pestis Antiqua, complete genomehypothetical protein6e-40164
NC_010465:933488:9569479569479580621116Yersinia pseudotuberculosis YPIII, complete genomeagmatine deiminase6e-40164
NC_014640:76992:99056990561001801125Achromobacter xylosoxidans A8 chromosome, complete genomeagmatine deiminase5e-38158
NC_014500:177824:1980611980611991641104Dickeya dadantii 3937 chromosome, complete genomeAgmatine deiminase3e-37155
NC_009667:1076718:1095345109534510964511107Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceagmatine deiminase2e-36153
NC_011831:853433:8736428736428746851044Chloroflexus aggregans DSM 9485, complete genomeAgmatine deiminase8e-31134
NC_009727:766000:7850677850677861041038Coxiella burnetii Dugway 7E9-12, complete genome8e-28124
NC_010814:2758902:2783326278332627843481023Geobacter lovleyi SZ, complete genomeAgmatine deiminase7e-26118
NC_019940:203718:2057962057962068541059Thioflavicoccus mobilis 8321 chromosome, complete genomepeptidylarginine deiminase-like protein1e-25117
NC_007796:31691:5110051100529951896Methanospirillum hungatei JF-1, complete genomePorphyromonas-type peptidyl-arginine deiminase4e-25115
NC_017080:166180:1675521675521685621011Phycisphaera mikurensis NBRC 102666, complete genomeagmatine deiminase5e-22105
NC_007645:2408125:2409027240902724100611035Hahella chejuensis KCTC 2396, complete genomePeptidylarginine deiminase and related enzyme1e-21104
NC_014033:1691822:1694938169493816959541017Prevotella ruminicola 23 chromosome, complete genomepeptidyl-arginine deiminase family protein3e-2099.4
NC_013161:1023716:1038146103814610391831038Cyanothece sp. PCC 8802, complete genomeAgmatine deiminase3e-1996.3
NC_011726:1023690:1038120103812010391571038Cyanothece sp. PCC 8801, complete genomeAgmatine deiminase3e-1996.3
NC_009615:1354122:1370301137030113713291029Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein4e-1789
NC_010729:265791:2766502766502776751026Porphyromonas gingivalis ATCC 33277, complete genomeputative arginine deiminase2e-1687
NC_002950:155873:1667331667331677581026Porphyromonas gingivalis W83, complete genomehypothetical protein2e-1686.7
NC_015571:440605:451464451464452402939Porphyromonas gingivalis TDC60, complete genomeputative arginine deiminase3e-1685.9
NC_018721:3155579:3160575316057531618011227Psychroflexus torquis ATCC 700755 chromosome, complete genomepeptidyl-arginine deiminase, Porphyromonas-type4e-1685.9
NC_015311:1827000:1827413182741318284711059Prevotella denticola F0289 chromosome, complete genomehypothetical protein6e-1478.6