Pre_GI: BLASTP Hits

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Query: NC_009615:1469642:1514975 Parabacteroides distasonis ATCC 8503 chromosome, complete genome

Start: 1514975, End: 1515514, Length: 540

Host Lineage: Parabacteroides distasonis; Parabacteroides; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Normal gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Parabacteroides distasonis is one of the most common fecal isolates, however, this organism is rarely isolated from clinical specimens.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014933:2195683:220691322069132207464552Bacteroides helcogenes P 36-108 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-58222
NC_015966:1145974:116775911677591168322564Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-27122
NC_013132:2523780:254108925410892541700612Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-24110
NC_004663:5194400:520235452023545202908555Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor3e-22104
NC_004663:1983439:198760019876001988163564Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor1e-21102
NC_015160:585220:589839589839590399561Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-2096.7
NC_015177:2642368:266242426624242662972549Pedobacter saltans DSM 12145 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1995.1
NC_015160:2239933:226227222622722262844573Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1993.6
NC_014032:269844:274798274798275382585Salinibacter ruber M8 chromosome, complete genomeRNA polymerase sigma factor9e-1993.2
NC_009615:2902871:291847629184762919027552Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor8e-1889.7
NC_015844:1188360:120641312064131207012600Zobellia galactanivorans, complete genomeRNA polymerase ECF-type sigma factor8e-1889.7
NC_007677:241846:245884245884246468585Salinibacter ruber DSM 13855, complete genomepossible sigma-70 factor, ECF subfamily, putative8e-1889.7
NC_015160:4285542:430098843009884301557570Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1788.2
NC_009615:3756196:376116937611693761735567Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor1e-1686.3
NC_016609:4152977:416982841698284170394567Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1685.9
NC_013061:2288134:229508222950822295651570Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma factor, sigma-70 family8e-1683.2
NC_015164:1812439:182623318262331826790558Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-1683.2
NC_019960:1272956:131266813126681313201534Prevotella dentalis DSM 3688 chromosome 1, complete sequenceRNA polymerase sigma-70 factor, bacteroides expansion family 11e-1582.4
NC_004663:3801071:380107138010713801646576Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor3e-1581.3
NC_016609:2150863:220256522025652203131567Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-1580.9
NC_016609:2951301:297559729755972976196600Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-1580.5
NC_015844:3524175:354680835468083547320513Zobellia galactanivorans, complete genomeRNA polymerase ECF-type sigma factor2e-1478.2
NC_013061:3390399:339834033983403398918579Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma-70 factor2e-1478.2
NC_014934:869715:876370876370876804435Cellulophaga algicola DSM 14237 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily4e-1477.8
NC_013061:1948365:196560719656071966182576Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma-70 factor4e-1477.4
NC_016609:4233701:423984042398404240400561Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-1477.4
NC_016610:2489415:249031924903192490903585Tannerella forsythia ATCC 43037 chromosome, complete genomeRNA polymerase sigma-70 factor2e-1375.5
NC_013061:1052957:105663210566321057201570Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma-70 factor2e-1375.1
NC_009614:1213500:124361912436191244167549Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase ECF-type sigma factor3e-1374.7
NC_019960:260997:265241265241265822582Prevotella dentalis DSM 3688 chromosome 1, complete sequenceRNA polymerase sigma-70 factor, bacteroides expansion family 15e-1373.9
NC_013061:2077603:209216020921602092726567Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma-70 factor6e-1373.6
NC_015277:2283530:229844122984412299025585Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1373.6
NC_015160:3749636:375426437542643754857594Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1271.2
NC_013132:1165218:116816611681661168714549Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1270.1
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily9e-1269.7
NC_009615:2902871:290901229090122909584573Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor1e-1169.3
NC_016776:625628:641499641499642059561Bacteroides fragilis 638R, complete genomeputative ECF-type RNA polymerase sigma factor1e-1169.3
NC_015160:1786350:180726218072621807885624Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1168.9
NC_015160:3180193:319703631970363197602567Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1168.9
NC_015164:2683162:268699926869992687556558Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.9
NC_015277:5211779:522919252291925229782591Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.6
NC_016631:5378810:537881053788105379649840Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-1168.2
NC_015160:1734454:175079817507981751364567Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1168.2
NC_006347:625328:638035638035638796762Bacteroides fragilis YCH46, complete genomeRNA polymerase ECF-type sigma factor3e-1168.2
NC_010943:1379707:138347313834731384135663Stenotrophomonas maltophilia K279a, complete genomeputative RNA polymerase sigma factor3e-1167.8
NC_016112:1735044:174948717494871749993507Methylomicrobium alcaliphilum chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1066.2
NC_013037:2851940:285194028519402852518579Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.5
NC_015160:797780:818328818328818885558Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.1
NC_013061:1236235:125870212587021259268567Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma factor, sigma-70 family3e-1064.7
NC_009615:4031335:404888040488804049425546Parabacteroides distasonis ATCC 8503 chromosome, complete genomeECF-type RNA polymerase sigma factor3e-1064.7
NC_020054:2066510:209302420930242093629606Fibrella aestuarina BUZ 2 drat genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1063.9
NC_013132:153163:170464170464171012549Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1063.9
NC_015311:720631:726166726166726678513Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 21e-0962.8
NC_008686:1592073:161056416105641611091528Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_004663:4373902:437668943766894377198510Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor2e-0962.4
NC_009142:267550:269255269255269797543Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase sigma-70 factor, ECF family3e-0961.6
NC_012225:1657248:166270016627001663245546Brachyspira hyodysenteriae WA1, complete genomeR polymerase sigma-70 factor 23e-0961.2
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0960.8
NC_017243:424132:440723440723441268546Brachyspira intermedia PWS/A chromosome, complete genomeR polymerase sigma-70 factor 24e-0960.8
NC_016609:6136411:615649361564936157086594Niastella koreensis GR20-10 chromosome, complete genomeRNA polymerase, sigma subunit, SigX4e-0960.8
NC_009925:1184442:118898911889891189603615Acaryochloris marina MBIC11017, complete genomeRNA polymerase sigma-24 subunit8e-0960.1
NC_013132:35061:561525615256742591Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0960.1
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit7e-0960.1
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0960.1
NC_009614:868452:874565874565875092528Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase ECF-type sigma factor9e-0959.7
NC_004663:3827521:384690938469093847418510Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor9e-0959.7
NC_013132:3877500:389615038961503896692543Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.3
NC_015160:2002570:200764020076402008434795Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_011830:1190502:120506412050641205564501Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0858.2
NC_010510:339879:346474346474347019546Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0858.2
NC_013421:1954915:197163419716341972143510Pectobacterium wasabiae WPP163, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0858.2
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor4e-0857.8
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857
NC_008536:5192235:520295352029535203483531Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857
NC_013173:1712138:173775417377541738296543Desulfomicrobium baculatum DSM 4028, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0856.6
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW1e-0756.2
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W1e-0756.2
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W1e-0756.2
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW1e-0756.2
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor1e-0756.2
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW1e-0756.2
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0856.2
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor1e-0755.8
NC_004129:195347:212505212505213086582Pseudomonas fluorescens Pf-5, complete genomeRNA polymerase sigma-70 factor1e-0755.8
NC_019904:2597722:259861425986142599261648Echinicola vietnamensis DSM 17526 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0755.5
NC_014375:1146328:117242311724231172977555Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0755.1
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor4e-0754.3
NC_012660:165559:186028186028186600573Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor6e-0753.9
NC_012560:2546000:254609625460962546800705Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma factor, FecI family5e-0753.9
NC_021150:2546000:254610825461082546812705Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor, FecI family5e-0753.9
NC_015064:2341152:236514523651452365786642Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.1
NC_007509:71954:736517365174262612Burkholderia sp. 383 chromosome 3, complete sequencesigma-24 (FecI-like)9e-0753.1
NC_015953:3782302:380522238052223805776555Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit9e-0753.1
NC_016609:5890292:591106159110615911663603Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0652.8
NC_011898:426951:428407428407428976570Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_015061:1481500:149778814977881498369582Rahnella sp. Y9602 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_017047:1434500:145073114507311451312582Rahnella aquatilis HX2 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0652.4
NC_020409:584000:592654592654593223570Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative sigma-70 factor, ECF subfamily3e-0651.6
NC_009454:1577319:163526116352611635848588Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit3e-0651.6
NC_013132:35061:544375443754988552Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0650.8
NC_007005:2191500:221606422160642216600537Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma-70 factor5e-0650.8
NC_009615:3581619:358324535832453583757513Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor6e-0650.4
NC_013446:2237854:225325022532502253825576Comamonas testosteroni CNB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.4
NC_014033:1664500:168220716822071682704498Prevotella ruminicola 23 chromosome, complete genomeECF family RNA polymerase sigma-70 factor6e-0650.4
NC_009615:2709040:272511227251122725837726Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor6e-0650.4
NC_013132:5792000:581114058111405811580441Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0650.1
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0650.1
NC_016582:5769080:579130957913095791824516Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative sigma factor9e-0649.7
NC_013722:1689125:169112716911271691711585Xanthomonas albilineans, complete genomeprobable rna polymerase sigma-e factor protein9e-0649.7
NC_008687:133728:154267154267154779513Paracoccus denitrificans PD1222 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily9e-0649.7