Pre_GI Gene

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Host: NC_016776 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016776:625628 Bacteroides fragilis 638R, complete genome

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
625628626491864hypothetical proteinBLASTP
6266116285331923putative bioynthetic peptidoglycan transglycosylaseQuickGO ontologyBLASTP
6286356299241290putative mismatch repair-like proteinQuickGO ontologyBLASTP
630003630563561hypothetical proteinBLASTP
6307376329052169putative melibiaseQuickGO ontologyBLASTP
6330196352562238putative glycosyl hydrolase alpha-xylosidaseQuickGO ontologyBLASTP
6353646370791716putative outer membrane proteinQuickGO ontologyBLASTP
6370966402663171Putative TonB-linked outer membrane proteinQuickGO ontologyBLASTP
640475641404930putative anti-sigma factorQuickGO ontologyBLASTP
641499642059561putative ECF-type RNA polymerase sigma factorQuickGO ontologyBLASTP
64221764231296hypothetical proteinBLASTP
6425006438311332putative outer membrane transportefflux proteinQuickGO ontologyBLASTP
6438716449711101putative transportefflux component proteinQuickGO ontologyBLASTP
6450806463301251putative ATP-binding component of ABC transporterQuickGO ontologyBLASTP
6463276475861260putative ABC transporterQuickGO ontologyBLASTP
647601648317717putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP