Pre_GI Gene

Some Help

Host: NC_004663 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004663:3827521 Bacteroides thetaiotaomicron VPI-5482, complete genome

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
382752138291461626putative outer membrane protein probably involved in nutrient bindingQuickGO ontologyBLASTP
382918238307441563glycosylhydrolase putative xylanaseQuickGO ontologyBLASTP
383076138319481188hypothetical protein
383213838333281191hypothetical proteinBLASTP
383357938354561878Naglucose symporterQuickGO ontologyBLASTP
383558738380612475conserved hypothetical protein with conserved domainsQuickGO ontologyBLASTP
38380753838701627hypothetical proteinBLASTP
383887238400081137conserved hypothetical protein with a weak acyltransferase domainQuickGO ontologyBLASTP
384001438418911878DNA topoisomerase IV subunit BQuickGO ontologyBLASTP
38418883842343456phosphopantetheine adenylyltransferaseQuickGO ontologyBLASTP
384244938440381590carboxy-terminal processing protease precursorQuickGO ontologyBLASTP
384411938467012583hypothetical proteinBLASTP
38469093847418510RNA polymerase ECF-type sigma factorQuickGO ontologyBLASTP
384743538484751041putative anti-sigma factorQuickGO ontologyBLASTP
38486613849089429hypothetical protein
384991838509341017hypothetical proteinBLASTP